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The map label for this gene is ypfI

Identifier: 16765805

GI number: 16765805

Start: 2599076

End: 2601094

Strand: Reverse

Name: ypfI

Synonym: STM2485

Alternate gene names: 16765805

Gene position: 2601094-2599076 (Counterclockwise)

Preceding gene: 16765806

Following gene: 16765799

Centisome position: 53.55

GC content: 62.61

Gene sequence:

>2019_bases
ATGTCTGATATCGATGCGCTACAGGCGTTAACGTCGCAAATGACACAGGAAGGCATTCGCCGTTTACTGGTCATCAGCGG
CGATGCGGCGTGGTGCCGGAAGCGGGCCGAGGCGATACGCGCTGCATTGCCCGGTGACTGGCTGTGGGTCGCGCCTGACG
CGCCCGCCCAGCCGTGCTGTACGCCACAGGCGTTACAAACGCTGCTGGGCCGTGAATTCCGTCATGCGATATTTGATGCC
TGGCAGGGCTTTGACGCCGCAGCGTTTGCCGCCCTGAGCGGGACCTTGCAGGCCGGAAGCTGGCTGCTTCTGCTGATGCC
GCCGTACGAGACGTGGGAAAGCAGGCCTGATACCGATTCACTGCGCTGGAGCGACTGCGCGCAGCCTATCCCCACACCGC
AGTTTGCACAGCATCTTAAACGGACTCTCTCCCGCGATCCGCAAACGCTGCTTTGGCGACAGCGCCAGCCGTTTTGCTGG
CCATCTTATCCTTCCCGTGAATGCTGGCGACCCGCCACCGGCGAGCCGCAGCCGGAGCAGGCGGCTATCTTATCGCGTTT
ACGTGAAATGCCGCCCGGCGTGGCGACGGTGATTGCCCCCCGTGGGCGCGGCAAATCGGCGCTGGCCGGGCAATTCATCT
CCCGGATGGCGGGCACGGCTATCGTGACCGCACCGGCGAAAACGGCAACGGATATCCTGGCAGCGTTTGCCGGTGAGCGG
TTCTGCTTTATGGCGCCGGATGCGTTGCTGGCGAGCGGGGCAAGAGCCGACTGGCTGGTGGTTGACGAGGCGGCGGCAAT
CCCCACGCCGCTGCTGCTGCAACTGGTTTCGCGCTTTCCCCGCATACTACTCACCACCACCGTTCAGGGCTACGAAGGCA
CCGGACGCGGTTTTTTACTTAAGTTTTGCGCCCGTTTTCCGCAGCTTCACCGCTTCACGCTTCGTCAGCCTGTCCGCTGG
GCGCCAGAATGCCCGCTGGAAAATATCGTCAGCGAGGCGCTGATATTCGACGATGAAGCGTTTGCGCAGGCGCCACATGG
CGCGATAGAAATCTCGGCGTTTTACCAACAGGCCTGGGTGAATACGCCCGCGTTGCCGAGGGCTGTGTATCAGTTACTGT
CGGGGGCGCACTATCGTACTTCGCCGCTGGATCTGCGCCGAATGATGGATGCGCCAGGACAGCATTTCTTGCAGGCTACG
GCGAATAACCGTGTGGCGGGCGCCCTCTGGCTGGTCGAAGAGGGCGGGTTATCCGCAGAACTCAGTCAGGCTGTATGGTG
CGGTTTCCGGCGGCCGCGTGGGAATCTGGTGGCGCAGTCGCTGGCGGCGCACGGTAGCGACCCTTTAGCCGCGACGCTGG
TTGGGCGTCGCGTAAGCCGTATCGCAGTGCACCCCGCTCGCCAGCGTGAAGGCATCGGTCAGCAGTTGATTGCCTGCGCG
TGCATGCAGGCGGCGCAGTGTGATTATCTTTCCGTCAGCTTCGGCTATACGCCGAAGCTGTGGCGTTTCTGGCAACGCTG
CGGCTTTGTACTGGTACGGATGGGCAACCATCGGGAGGCGAGCAGCGGTTGCTATACGGCGATGGCGTTATTGCCGCTGA
GCGACGCGGGAAAACGGCTGGCGCAGCAGGAACACCGGCGTTTGCGCCGCGATGCGGATATCCTGACGCAGTGGAACGGC
GAGGCGATACCGCTGGCGGCGTTGCGCGAACAGGCGCTTAATGATGAAGACTGGCGTGAGCTGGTCGGTTTTGCGTTCGC
GCACCGTCCGCTACTGACATCGTTAGGTTGCCTGCATCGTTTACTGCAATACAGCGCATTGCCATTACCGGCGCTGAGAG
GGCGGCTGGAAGAAAAAGCCAGCGATGCCGAACTGTGCGCCCGGCTACGCATTTCAGGCCGTAAAGCTCTGCTGGCGTTG
CAGCGTGCGCAGGCGGCGCAGGCGCTAATTGCGTTGGATGCCGGACGAACGCAGAGTTTGCGCGACGTAATGCCCGGCGG
TGGGGACCATGCCGGATAG

Upstream 100 bases:

>100_bases
CTCAGAACAGCGCTACAGCTGGTTTAAGCGTGGATTTGACAGCGGTGACCCGGCGCAATGTAATACGTTTGGCAAAAACT
TTTGATAAACCGGGGCAGGG

Downstream 100 bases:

>100_bases
CGATACCTGTCCGGCATGATATCCGGTTACTTTTTCGGCTGATCTTTCTTCGGCCAGTCGTCTTCATCGTCCCACTTATC
GTTAAAATCGCGATGCGGGG

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MSDIDALQALTSQMTQEGIRRLLVISGDAAWCRKRAEAIRAALPGDWLWVAPDAPAQPCCTPQALQTLLGREFRHAIFDA
WQGFDAAAFAALSGTLQAGSWLLLLMPPYETWESRPDTDSLRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQRQPFCW
PSYPSRECWRPATGEPQPEQAAILSRLREMPPGVATVIAPRGRGKSALAGQFISRMAGTAIVTAPAKTATDILAAFAGER
FCFMAPDALLASGARADWLVVDEAAAIPTPLLLQLVSRFPRILLTTTVQGYEGTGRGFLLKFCARFPQLHRFTLRQPVRW
APECPLENIVSEALIFDDEAFAQAPHGAIEISAFYQQAWVNTPALPRAVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQAT
ANNRVAGALWLVEEGGLSAELSQAVWCGFRRPRGNLVAQSLAAHGSDPLAATLVGRRVSRIAVHPARQREGIGQQLIACA
CMQAAQCDYLSVSFGYTPKLWRFWQRCGFVLVRMGNHREASSGCYTAMALLPLSDAGKRLAQQEHRRLRRDADILTQWNG
EAIPLAALREQALNDEDWRELVGFAFAHRPLLTSLGCLHRLLQYSALPLPALRGRLEEKASDAELCARLRISGRKALLAL
QRAQAAQALIALDAGRTQSLRDVMPGGGDHAG

Sequences:

>Translated_672_residues
MSDIDALQALTSQMTQEGIRRLLVISGDAAWCRKRAEAIRAALPGDWLWVAPDAPAQPCCTPQALQTLLGREFRHAIFDA
WQGFDAAAFAALSGTLQAGSWLLLLMPPYETWESRPDTDSLRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQRQPFCW
PSYPSRECWRPATGEPQPEQAAILSRLREMPPGVATVIAPRGRGKSALAGQFISRMAGTAIVTAPAKTATDILAAFAGER
FCFMAPDALLASGARADWLVVDEAAAIPTPLLLQLVSRFPRILLTTTVQGYEGTGRGFLLKFCARFPQLHRFTLRQPVRW
APECPLENIVSEALIFDDEAFAQAPHGAIEISAFYQQAWVNTPALPRAVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQAT
ANNRVAGALWLVEEGGLSAELSQAVWCGFRRPRGNLVAQSLAAHGSDPLAATLVGRRVSRIAVHPARQREGIGQQLIACA
CMQAAQCDYLSVSFGYTPKLWRFWQRCGFVLVRMGNHREASSGCYTAMALLPLSDAGKRLAQQEHRRLRRDADILTQWNG
EAIPLAALREQALNDEDWRELVGFAFAHRPLLTSLGCLHRLLQYSALPLPALRGRLEEKASDAELCARLRISGRKALLAL
QRAQAAQALIALDAGRTQSLRDVMPGGGDHAG
>Mature_671_residues
SDIDALQALTSQMTQEGIRRLLVISGDAAWCRKRAEAIRAALPGDWLWVAPDAPAQPCCTPQALQTLLGREFRHAIFDAW
QGFDAAAFAALSGTLQAGSWLLLLMPPYETWESRPDTDSLRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQRQPFCWP
SYPSRECWRPATGEPQPEQAAILSRLREMPPGVATVIAPRGRGKSALAGQFISRMAGTAIVTAPAKTATDILAAFAGERF
CFMAPDALLASGARADWLVVDEAAAIPTPLLLQLVSRFPRILLTTTVQGYEGTGRGFLLKFCARFPQLHRFTLRQPVRWA
PECPLENIVSEALIFDDEAFAQAPHGAIEISAFYQQAWVNTPALPRAVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQATA
NNRVAGALWLVEEGGLSAELSQAVWCGFRRPRGNLVAQSLAAHGSDPLAATLVGRRVSRIAVHPARQREGIGQQLIACAC
MQAAQCDYLSVSFGYTPKLWRFWQRCGFVLVRMGNHREASSGCYTAMALLPLSDAGKRLAQQEHRRLRRDADILTQWNGE
AIPLAALREQALNDEDWRELVGFAFAHRPLLTSLGCLHRLLQYSALPLPALRGRLEEKASDAELCARLRISGRKALLALQ
RAQAAQALIALDAGRTQSLRDVMPGGGDHAG

Specific function: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP)

COG id: COG1444

COG function: function code R; Predicted P-loop ATPase fused to an acetyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain

Homologues:

Organism=Homo sapiens, GI221316741, Length=391, Percent_Identity=24.5524296675192, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI221316723, Length=391, Percent_Identity=24.5524296675192, Blast_Score=96, Evalue=2e-19,
Organism=Escherichia coli, GI1788818, Length=662, Percent_Identity=71.7522658610272, Blast_Score=962, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17507621, Length=268, Percent_Identity=26.1194029850746, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24640662, Length=244, Percent_Identity=27.0491803278689, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TMCA_SALTY (Q8ZN74)

Other databases:

- EMBL:   AE006468
- RefSeq:   NP_461420.1
- ProteinModelPortal:   Q8ZN74
- GeneID:   1254007
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2485
- NMPDR:   fig|99287.1.peg.2401
- HOGENOM:   HBG416637
- OMA:   CARFPQL
- ProtClustDB:   CLSK880403
- BioCyc:   STYP99287:STM2485-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01886
- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR013562
- InterPro:   IPR007807
- Gene3D:   G3DSA:3.40.630.30

Pfam domain/function: PF08351 DUF1726; PF05127 DUF699; SSF55729 Acyl_CoA_acyltransferase

EC number: NA

Molecular weight: Translated: 74017; Mature: 73886

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS51186 GNAT

Important sites: BINDING 180-180 BINDING 319-319 BINDING 506-506

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIDALQALTSQMTQEGIRRLLVISGDAAWCRKRAEAIRAALPGDWLWVAPDAPAQPCC
CCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
TPQALQTLLGREFRHAIFDAWQGFDAAAFAALSGTLQAGSWLLLLMPPYETWESRPDTDS
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCC
LRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQRQPFCWPSYPSRECWRPATGEPQPEQ
CCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHH
AAILSRLREMPPGVATVIAPRGRGKSALAGQFISRMAGTAIVTAPAKTATDILAAFAGER
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCC
FCFMAPDALLASGARADWLVVDEAAAIPTPLLLQLVSRFPRILLTTTVQGYEGTGRGFLL
EEEECCHHHHHCCCCCCEEEEECHHHCCHHHHHHHHHHCCCEEEHEEECCCCCCCCHHHH
KFCARFPQLHRFTLRQPVRWAPECPLENIVSEALIFDDEAFAQAPHGAIEISAFYQQAWV
HHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHC
NTPALPRAVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQATANNRVAGALWLVEEGGLSAE
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEECCCCCHH
LSQAVWCGFRRPRGNLVAQSLAAHGSDPLAATLVGRRVSRIAVHPARQREGIGQQLIACA
HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHH
CMQAAQCDYLSVSFGYTPKLWRFWQRCGFVLVRMGNHREASSGCYTAMALLPLSDAGKRL
HHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHH
AQQEHRRLRRDADILTQWNGEAIPLAALREQALNDEDWRELVGFAFAHRPLLTSLGCLHR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYSALPLPALRGRLEEKASDAELCARLRISGRKALLALQRAQAAQALIALDAGRTQSL
HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
RDVMPGGGDHAG
HHHCCCCCCCCC
>Mature Secondary Structure 
SDIDALQALTSQMTQEGIRRLLVISGDAAWCRKRAEAIRAALPGDWLWVAPDAPAQPCC
CHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
TPQALQTLLGREFRHAIFDAWQGFDAAAFAALSGTLQAGSWLLLLMPPYETWESRPDTDS
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCC
LRWSDCAQPIPTPQFAQHLKRTLSRDPQTLLWRQRQPFCWPSYPSRECWRPATGEPQPEQ
CCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHH
AAILSRLREMPPGVATVIAPRGRGKSALAGQFISRMAGTAIVTAPAKTATDILAAFAGER
HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCC
FCFMAPDALLASGARADWLVVDEAAAIPTPLLLQLVSRFPRILLTTTVQGYEGTGRGFLL
EEEECCHHHHHCCCCCCEEEEECHHHCCHHHHHHHHHHCCCEEEHEEECCCCCCCCHHHH
KFCARFPQLHRFTLRQPVRWAPECPLENIVSEALIFDDEAFAQAPHGAIEISAFYQQAWV
HHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHC
NTPALPRAVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQATANNRVAGALWLVEEGGLSAE
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEECCCCCHH
LSQAVWCGFRRPRGNLVAQSLAAHGSDPLAATLVGRRVSRIAVHPARQREGIGQQLIACA
HHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHH
CMQAAQCDYLSVSFGYTPKLWRFWQRCGFVLVRMGNHREASSGCYTAMALLPLSDAGKRL
HHHHHCCCEEEEECCCCHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHH
AQQEHRRLRRDADILTQWNGEAIPLAALREQALNDEDWRELVGFAFAHRPLLTSLGCLHR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYSALPLPALRGRLEEKASDAELCARLRISGRKALLALQRAQAAQALIALDAGRTQSL
HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
RDVMPGGGDHAG
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609