| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yfeW [H]
Identifier: 16765798
GI number: 16765798
Start: 2587868
End: 2589166
Strand: Direct
Name: yfeW [H]
Synonym: STM2478
Alternate gene names: 16765798
Gene position: 2587868-2589166 (Clockwise)
Preceding gene: 16765794
Following gene: 16765800
Centisome position: 53.28
GC content: 46.04
Gene sequence:
>1299_bases ATGAAATTTACTCTCGTTGCGACGGTTCTACTGACGTTTTCCCTTTCAGCTTTTGCCGTTGAGTATCCTGTATTGACCAC CGCGAGCCCTGATCAGGTGGGGTTTGATAGCCAAAAACTTCACCGACTTGATGGCTGGATTCAAAATCAAATTGATGCCG GATATCCCAGCATCAATCTTCTGGTGATAAAAGATAATCATATTGTTCTACAAAAAGCCTGGGGCTATGCCAAAAAATAT GACGGTTCCACGCTGTTAGCCCATCCCATTCGGGCGACCACTAACACGATGTATGATCTGGCTTCAAACACAAAAATGTA TGCCACTAACTTCGCATTGCAAAAACTAGTGTATGAAGGAAAAATAGATGTCAATGATTTGGTATCAAAATATATCCCCG GCTTTAAGGATATGCCTGGGGATAAAATAAAAGGCAAAAATAAACTCCGCATTATTGATATTCTTCATCACGTCGCGGGC TTTCCTGCCGACCCACAATATCCTAATAAAAACGTCGCCGGTAAATTATTCTCACAGAGTAAAAGCACTACTCTGGAGAT GATTAAAAAGACACCGCTGGAATATCAACCTGGGTCGAAGCATATCTACAGCGACGTGGATTATATGATTCTTGGTTTTA TCATTGAATCGATAACGGCAATGCCATTAGATCGCTACGTCGAAACCACCATTTATAAACCGCTCGGATTAAAACATACC GTCTTTAACCCGCTGATGAAAGGCTTCACGCCGCCGCAAATCGCCGCAACGGAACTACATGGCAACACGCGTGACGGCGT GATTCATTTCCCCAATATTCGCACCAATACACTATGGGGCCAGGTGCATGATGAAAAAGCCTGGTACTCAATGGGCGGCG TTTCAGGACACGCCGGACTGTTTTCTGACACCCATGATATGGCTGTGTTAATGCAAGTCATGCTCAATGGGGGCGGCTAC GGTAACGTGAAGCTATTCGACGACAAAACGGTTGCGCAGTTTACTCGCCGCTCGCCAGAAGACGCTACCTTTGGTCTGGG GTGGCGCGTTAACGGCAACGCCTCAATGACCCCCACGTTCGGGGTATTAGCCAGTCCGCAAACGTATGGACATACCGGAT GGACCGGAACGCTGACGTCTATCGATCCGGTTAATCATATGGCGATTGTGATTTTAGGTAACAGGCCGCACTCGCCGGTA GCAAATCCTAAAGTGAATCCGAATGTTTTTGTCAGTGGATTATTACCTGCGGCGACGTATGGCTGGATTGTTGACCAGAT ATATGGTTCCTTAAAATAA
Upstream 100 bases:
>100_bases ATTTTTCTGTCACTGCCATGACCATATTCTGCTTCTCCGGGCCGCAGAGTCCATGCTCGCGATATGATTTGACGGCCGGA GTGAGACTGAGGGAATCATC
Downstream 100 bases:
>100_bases AAATTAAGAGCCTATCTCTGTAGGCGTTATTGGCGCAGCCAGTTTGGACACGGACAGCGCGCAAAAACCGGAGCGTACAC GTAGTACGTGAGGTTTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKY DGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAG FPADPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGY GNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPV ANPKVNPNVFVSGLLPAATYGWIVDQIYGSLK
Sequences:
>Translated_432_residues MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKY DGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAG FPADPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGY GNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPV ANPKVNPNVFVSGLLPAATYGWIVDQIYGSLK >Mature_432_residues MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKY DGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAG FPADPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGY GNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTFGVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPV ANPKVNPNVFVSGLLPAATYGWIVDQIYGSLK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=432, Percent_Identity=72.9166666666667, Blast_Score=678, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 47697; Mature: 47697
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINL CCCHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE LVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEG EEEECCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCC KIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAGFPADPQYPNKNVAGKLFSQS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC KSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHH VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGL HHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCEECEECCCCHHEECCCCCCCCCC FSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTF CCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC GVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPVANPKVNPNVFVSGLLPAATY CEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHH GWIVDQIYGSLK HHHHHHHHHCCC >Mature Secondary Structure MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINL CCCHHHHHHHHHHHHHHHEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE LVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEG EEEECCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCC KIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAGFPADPQYPNKNVAGKLFSQS CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC KSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHH VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGL HHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCCCEECEECCCCHHEECCCCCCCCCC FSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTF CCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC GVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPVANPKVNPNVFVSGLLPAATY CEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHH GWIVDQIYGSLK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA