Click here to switch to the map view.

The map label for this gene is ypfG [H]

Identifier: 16765796

GI number: 16765796

Start: 2585921

End: 2586964

Strand: Reverse

Name: ypfG [H]

Synonym: STM2476

Alternate gene names: 16765796

Gene position: 2586964-2585921 (Counterclockwise)

Preceding gene: 16765797

Following gene: 16765795

Centisome position: 53.26

GC content: 56.7

Gene sequence:

>1044_bases
ATGCGCTACCGCGTTATTCTTTTTTGTCTGTTTGGCCTGTTGCCGGTCCAGCTACTGTGGGCTGCGCCAGCGCAACGGAC
TTTTTCCGACTGGCAGGTCACCTGCAATAACCAAAATTTTTGCGTAGCGCGCAATACTGGCGAACATCATGGGCTGGTGA
TGACATTAAGCCGCAGCGCCGGGGCGCGTACCGATGCGGTACTGCGTATCGACCGCGGCGGTTTGGCGCCGCCCGACGCT
AAAGAAGCCGCAATTGCGCCTCGCTTATTGCTGGATGGCAAACCGCTTTCGTTCAACAGTCCACACTGGCGCGTGTCGCC
CTGGCATCTCATGACCGGCGATCCTGCCACCATCACCGCATTTTTACAGACGATTCAGGATGCGCAGGCCATCACCTTAA
AAAACGGCGTTCAGACGCTTTCGCTGGCGGGATTAAAAGCGGCATTACTGTTTATCGACGCGCAACAAAAACGTGTGGGC
AGCGAAACCGCCTGGATTGAAAAAGGAAACGAACCGCCGCTCAGCGTGCCCCCGGCACCGGCATTAAAGGGGATCGCCGT
GATTAATCCAACGCCCGTACCGCTGAGTGAGGAAGAACGCGACGATCTGCTGGACTACGCAGCATGGCGGGTAAACGGCA
TTCGTTGTTCGCTTGACCCGCTGCGTCGCGAGACGCAGGTCAGCGCGTTGACGGATGATAAAGCGTTATTGATTGTTAAC
TGCGAAGCCGGCGCCTATAACACTATTGATCTCGCCTGGGTAGTTTCACGCAAAAAAACGCTCGTCTCGCGCGCCGTACG
TTTGCGGCTGCCGTTTAATCGCGGCGTCGAAAGTAATGACATGGAGTTGATGAACGTCTTCTTTGACGAGAAAACGCGCG
AGCTGGTGACGTTGGCGAAAGGGCGGGGGTTAACCGACTGCGGTATCCAGACGCGCTGGCGTTATGATGGCGATCGTTTT
CGTCTGGTGCGTTATGCCGAAGAACCGAGCTGCGATAGCTGGCACGGGCCGGATGCCTGGCCTACGCTGTGGATCACGCG
TTGA

Upstream 100 bases:

>100_bases
ACAAAAAAGACCAATCCGATAAATCTGATTGAGAACCCTGAGGCGCGCAAGGAAGATACCGCCTTAGCTGTGTTGTTCTG
AATCTGGGGTTGTTCCGTTC

Downstream 100 bases:

>100_bases
ATCCTGGTTGTTATCCCCTTTTCAGAATAGGGATACACCTATTGAGGTTTCATTTATGGTATAGAGATTGCTACGTTACG
GTAGGATTGTTACTTTACCC

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARNTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDA
KEAAIAPRLLLDGKPLSFNSPHWRVSPWHLMTGDPATITAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
SETAWIEKGNEPPLSVPPAPALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLRRETQVSALTDDKALLIVN
CEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDMELMNVFFDEKTRELVTLAKGRGLTDCGIQTRWRYDGDRF
RLVRYAEEPSCDSWHGPDAWPTLWITR

Sequences:

>Translated_347_residues
MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARNTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDA
KEAAIAPRLLLDGKPLSFNSPHWRVSPWHLMTGDPATITAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
SETAWIEKGNEPPLSVPPAPALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLRRETQVSALTDDKALLIVN
CEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDMELMNVFFDEKTRELVTLAKGRGLTDCGIQTRWRYDGDRF
RLVRYAEEPSCDSWHGPDAWPTLWITR
>Mature_347_residues
MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARNTGEHHGLVMTLSRSAGARTDAVLRIDRGGLAPPDA
KEAAIAPRLLLDGKPLSFNSPHWRVSPWHLMTGDPATITAFLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVG
SETAWIEKGNEPPLSVPPAPALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLRRETQVSALTDDKALLIVN
CEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDMELMNVFFDEKTRELVTLAKGRGLTDCGIQTRWRYDGDRF
RLVRYAEEPSCDSWHGPDAWPTLWITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788809, Length=347, Percent_Identity=77.2334293948127, Blast_Score=560, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009560 [H]

Pfam domain/function: PF06674 DUF1176 [H]

EC number: NA

Molecular weight: Translated: 38724; Mature: 38724

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARNTGEHHGLVMTLSRSA
CCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCC
GARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFNSPHWRVSPWHLMTGDPATITA
CCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCEEECCEEEECCCCHHHHH
FLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVGSETAWIEKGNEPPLSVPPAP
HHHHHHCCCEEEECCCCCEEHHHHHEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC
ALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLRRETQVSALTDDKALLIVN
CCCCEEEECCCCCCCCCCHHHHHHHHHHHEECCEEECCHHHCCHHHHEEECCCCEEEEEE
CEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDMELMNVFFDEKTRELVTLAK
ECCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHC
GRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDSWHGPDAWPTLWITR
CCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRYRVILFCLFGLLPVQLLWAAPAQRTFSDWQVTCNNQNFCVARNTGEHHGLVMTLSRSA
CCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCC
GARTDAVLRIDRGGLAPPDAKEAAIAPRLLLDGKPLSFNSPHWRVSPWHLMTGDPATITA
CCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCEEECCEEEECCCCHHHHH
FLQTIQDAQAITLKNGVQTLSLAGLKAALLFIDAQQKRVGSETAWIEKGNEPPLSVPPAP
HHHHHHCCCEEEECCCCCEEHHHHHEEEEEEEECHHHHCCCCEEEEECCCCCCCCCCCCC
ALKGIAVINPTPVPLSEEERDDLLDYAAWRVNGIRCSLDPLRRETQVSALTDDKALLIVN
CCCCEEEECCCCCCCCCCHHHHHHHHHHHEECCEEECCHHHCCHHHHEEECCCCEEEEEE
CEAGAYNTIDLAWVVSRKKTLVSRAVRLRLPFNRGVESNDMELMNVFFDEKTRELVTLAK
ECCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHC
GRGLTDCGIQTRWRYDGDRFRLVRYAEEPSCDSWHGPDAWPTLWITR
CCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]