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The map label for this gene is yfeD [H]

Identifier: 16765738

GI number: 16765738

Start: 2529717

End: 2530109

Strand: Direct

Name: yfeD [H]

Synonym: STM2414

Alternate gene names: 16765738

Gene position: 2529717-2530109 (Clockwise)

Preceding gene: 16765737

Following gene: 16765743

Centisome position: 52.08

GC content: 48.35

Gene sequence:

>393_bases
ATGAAAAGATTACGCAGTAAAATGACCACTGAAGAGCTGGCTGAATGCCTCGGCGTGGCCAGACAAACCGTCAATCGCTG
GATCAGAGAACAACACTGGAAAACCGAAAAATTTCCCGGCGTCAAAGGCGGACGCGCAAGACTCATCCATATTGATGCCA
GCGTGCGGGAGTTTATTCTCAATATTCCGGCTTTTCGCAAACTGCCTGCGTTTTATCAGGCGGAAGAGGCTTTCGCAGAA
TATGCGAACGCGGCGCACAGTCATGCTTATCGACAAATTATTGATGCCGTTGAAAATATGTCTGCTCAGGAACAGGAAAA
ACTGGCGCTGTTTTTATCGCGGGAAGGTATTCGCGGATTTCTGACGCGTTTAGGTATCAATGAGGCGGACTAA

Upstream 100 bases:

>100_bases
GAGATGACCTCATCCGAGCAGAAACAGTTTACCTCTCTCCTCGTGCGTGAAGGGATTACCGGTTTGTTACAACGCTTAGG
GATACGCGATAGCAAATAAT

Downstream 100 bases:

>100_bases
CAAATAATAAACGGCAGGCGTCTGCCCTGCCGTTTATTCTGTTTCAGCTGGCGTTACTGCTGACTTTCACGCTCGGCGAT
AAAGCCCAGCGCTTTGTTGA

Product: negative regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAE
YANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINEAD

Sequences:

>Translated_130_residues
MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAE
YANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINEAD
>Mature_130_residues
MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEAFAE
YANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINEAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510963, Length=129, Percent_Identity=70.5426356589147, Blast_Score=188, Evalue=9e-50,
Organism=Escherichia coli, GI87082097, Length=124, Percent_Identity=37.9032258064516, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 14974; Mature: 14974

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFIL
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHH
NIPAFRKLPAFYQAEEAFAEYANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LTRLGINEAD
HHHHCCCCCC
>Mature Secondary Structure
MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFIL
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHH
NIPAFRKLPAFYQAEEAFAEYANAAHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LTRLGINEAD
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2201776; 9205837; 9278503 [H]