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The map label for this gene is yfdK [H]

Identifier: 16765561

GI number: 16765561

Start: 2334013

End: 2334456

Strand: Reverse

Name: yfdK [H]

Synonym: STM2233

Alternate gene names: 16765561

Gene position: 2334456-2334013 (Counterclockwise)

Preceding gene: 16765562

Following gene: 39546338

Centisome position: 48.06

GC content: 45.05

Gene sequence:

>444_bases
ATGAGCATAATATGTTTTTCCTCGACATCAAACACATATTTTTCAGAGGAGAACATTCCAGCTTATAAGGCCAGTGGGTT
GTGGTCGAATGATTTTTATGCTCTGACCGATGAAGAAGTTGATAAGTATTATATGAAAACTCCACCAAAGGGAATGTATC
TCGGTTCATCAAATGGACGTATTGCCTGGGTTTGTATTCCACCTCCAACGCAAGATGATTTAATTTCTGCCGCAAATCAG
GAAAAGAAGAAGAGAATCGATCAGGCCAACGAGCACATGAACAGCAGGCGGTGGCCGGGCAAAGCGGCGCTCGGGCGCCT
GACGGGCGACGAACTGGCGCAGTACAATCTGTGGCTGGATTATCTCGATGCGCTGAAAGCGGTTGATACATCGGTTGCAC
AAAATATAGCATGCCCCATCAGAAAAGCTATACACATAAAATAA

Upstream 100 bases:

>100_bases
ATATCCCCAACATATTTGATTGAGAACAACGGTGCTATTCGTATATTTAATCCATCCGGTGGCGATAATTCCATATCTGT
AATTTACATGGGGTATTGAC

Downstream 100 bases:

>100_bases
TTTGCATTATTGTTGTAGTTTTATAAAATAAAAAGAGGGGCAAGCCCCTCTGTTTATTTTGAAATCTGCTTTTTCACTTC
CTCAATAAACCACCCTGAGC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQ
EKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK

Sequences:

>Translated_147_residues
MSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQ
EKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK
>Mature_146_residues
SIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQE
KKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTSVAQNIACPIRKAIHIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymfS [H]

Homologues:

Organism=Escherichia coli, GI1788696, Length=144, Percent_Identity=46.5277777777778, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI1787401, Length=98, Percent_Identity=46.9387755102041, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 16569; Mature: 16438

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGR
CEEEEEECCCCCEECCCCCCCEECCCCCCCCEEEECHHHHHHHHHCCCCCCEEEECCCCE
IAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLD
EEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHH
YLDALKAVDTSVAQNIACPIRKAIHIK
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGR
EEEEEECCCCCEECCCCCCCEECCCCCCCCEEEECHHHHHHHHHCCCCCCEEEECCCCE
IAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLD
EEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHH
YLDALKAVDTSVAQNIACPIRKAIHIK
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]