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The map label for this gene is msgA [H]

Identifier: 16765559

GI number: 16765559

Start: 2331492

End: 2331782

Strand: Direct

Name: msgA [H]

Synonym: STM2231

Alternate gene names: 16765559

Gene position: 2331492-2331782 (Clockwise)

Preceding gene: 16765557

Following gene: 16765560

Centisome position: 48.0

GC content: 47.77

Gene sequence:

>291_bases
TTGCTGGACAAACCGCTGTGTGGTGACGGTCTTCCGGCCATTAGGTTCCTGCTGTATCGAAGCATACCAGGCTATTTCAA
TATTGATGGTTTGCCCGGAGCAAAAGATATCATTCTGGGAGAATTGACTAAGAGGGTTCACCGGATCTTCCCCGATGCTG
ATGTTCGGGTTAAACCGATGATGACACTACCGGCGATCAATACTGACGCCAGCAAGCATGAGAAGGAACAGATAAGCCGT
ACTGTTCAGGAAATGTTTGAAGAGGCTGAATTCTGGTTAGTGAGCGAGTAA

Upstream 100 bases:

>100_bases
TCTCCCCTTCCTGCGTTGATACATCGCGGAATGTTGTCACATACCACTCGATCCATTCGTTAGCCTGCTTCATCGTCCAG
TTCCAGTTAACCTTGCTCAG

Downstream 100 bases:

>100_bases
AGTTTTTCAATATCCGCCATAGTTACGTTTTGATCGCGCTGTGGCGGATTTTCATTTTCGTAAACGTTCCCTTTTCCCAT
TCTCAAAATTTACAGGGTGC

Product: virulence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISR
TVQEMFEEAEFWLVSE

Sequences:

>Translated_96_residues
MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISR
TVQEMFEEAEFWLVSE
>Mature_96_residues
MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPMMTLPAINTDASKHEKEQISR
TVQEMFEEAEFWLVSE

Specific function: Affects survival in macrophages [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010391 [H]

Pfam domain/function: PF06183 DinI [H]

EC number: NA

Molecular weight: Translated: 10932; Mature: 10932

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPM
CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCE
MTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MLDKPLCGDGLPAIRFLLYRSIPGYFNIDGLPGAKDIILGELTKRVHRIFPDADVRVKPM
CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCE
MTLPAINTDASKHEKEQISRTVQEMFEEAEFWLVSE
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]