| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16765554
Identifier: 16765554
GI number: 16765554
Start: 2326826
End: 2327446
Strand: Reverse
Name: 16765554
Synonym: STM2225
Alternate gene names: NA
Gene position: 2327446-2326826 (Counterclockwise)
Preceding gene: 16765555
Following gene: 16765551
Centisome position: 47.92
GC content: 43.64
Gene sequence:
>621_bases GTGAGTAAAGGAATACGTCAGAGGCCGCCTGTTAATTTCAGTTTATTTCGGCAGGTTTTGTATGCGCACATTGTCGCATT TTTGATGATGTTGATGCTCGGCATGGTGTTCACCGTTCTCTCGTTGGTACTGTTTTATACTTATGGCACCAACTGGTTAC TGAGCTTGTTCATATGCCCGCTGTTCTTGTTAAGTGGTTTATTCATTACTGGATTTGCTTTTAAATCAACCTGGTCCAGC ATACGTTACTATTACGACAAGGGGCAGTTGAAACGGTATGGACTCAATCTTGATGCAACTTTGACGCATAAAGAGAAGGT GGAAATACGCATCGATAATGCAAAGCGTCAAGTGCGTGTAGATGAACTGGAACTCCATGTCTTATTTGATTTTCAGTTTG ATAGCAAGACATGGAGCTGCGGCGACTTACTGACCAATGAAAAGGTATTTGATGCGTTGAATGATGGGCAAACGATACCA ATACGAATTTTGCCATGGAAACCGGAAAGTGCCAGCGTTCGTCAACGGGCATTATTCAATCGGCTTAAAGGTATGAATAC CGCGGCGGAAACTACAGATCCTCGATTAGGGGAGGCGCTAATTGAATGTGGCGAGGTGTAA
Upstream 100 bases:
>100_bases TACCCTGACTATCAAAGGGACGCCGCCGAATTTGCGCGATCAGTTGCAGCGACGCACGTCGGGCGGGAAATAAAGGCATA CGACATAAAAGGACGCCGTA
Downstream 100 bases:
>100_bases GAAAGCAGAAAAGCAAAGTGGGTTCTCGTTGCTCTGCATGTCGTCAAATTCAATTAAACGCATAAAAAAACCCCGCCGGG GCGGGGTTTTTCTTCAACTT
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLFYTYGTNWLLSLFICPLFLLSGLFITGFAFKSTWSS IRYYYDKGQLKRYGLNLDATLTHKEKVEIRIDNAKRQVRVDELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIP IRILPWKPESASVRQRALFNRLKGMNTAAETTDPRLGEALIECGEV
Sequences:
>Translated_206_residues MSKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLFYTYGTNWLLSLFICPLFLLSGLFITGFAFKSTWSS IRYYYDKGQLKRYGLNLDATLTHKEKVEIRIDNAKRQVRVDELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIP IRILPWKPESASVRQRALFNRLKGMNTAAETTDPRLGEALIECGEV >Mature_205_residues SKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLFYTYGTNWLLSLFICPLFLLSGLFITGFAFKSTWSSI RYYYDKGQLKRYGLNLDATLTHKEKVEIRIDNAKRQVRVDELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIPI RILPWKPESASVRQRALFNRLKGMNTAAETTDPRLGEALIECGEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23747; Mature: 23616
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLFYTYGTNWLLSLFICP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LFLLSGLFITGFAFKSTWSSIRYYYDKGQLKRYGLNLDATLTHKEKVEIRIDNAKRQVRV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEEEEEECCCCHHEEH DELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIPIRILPWKPESASVRQRALFN EEEEEEEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHH RLKGMNTAAETTDPRLGEALIECGEV HHHCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SKGIRQRPPVNFSLFRQVLYAHIVAFLMMLMLGMVFTVLSLVLFYTYGTNWLLSLFICP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LFLLSGLFITGFAFKSTWSSIRYYYDKGQLKRYGLNLDATLTHKEKVEIRIDNAKRQVRV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEEEEEECCCCHHEEH DELELHVLFDFQFDSKTWSCGDLLTNEKVFDALNDGQTIPIRILPWKPESASVRQRALFN EEEEEEEEEEEEECCCCCCHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHH RLKGMNTAAETTDPRLGEALIECGEV HHHCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA