| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yeiU [H]
Identifier: 16765542
GI number: 16765542
Start: 2312525
End: 2313244
Strand: Direct
Name: yeiU [H]
Synonym: STM2213
Alternate gene names: 16765542
Gene position: 2312525-2313244 (Clockwise)
Preceding gene: 16765541
Following gene: 16765543
Centisome position: 47.61
GC content: 50.83
Gene sequence:
>720_bases ATGACGATGAAAACCCGCTATTCCTTGATAATTCTGCTTAATGCCGCCGGTCTGGCGCTGTTTTTGTCATGGTATCTTCC CGTCAATCACGGCTTCTGGTTCACCATTGATTCCGGCATATTCCACTTCTTTAACCAGAAACTGGTGGAAAGCCACGCGT TCCTCTGGTGGGTCGCTATTACCAATAATCGGGCGTTTGACGGCTGTTCGCTGCTGGCGATGGGCGGACTGATGCTCAGT TTCTGGCTAAAAGAAAACGCATCGGGCCGGCGGCGCATTGTGATAATCGGATTGGTCATGCTACTAACAGCGGTGGTGCT TAACCAACTCGGTCAGGCGCTGATCCCCGTCAAGCGCGCCAGCCCAACGCTCTCTTTTGAGCATATTTATCGCGTCAGCG AGTTGCTGCACATCCCGACAAAAGACGCGTCAAAAGACAGTTTCCCAGGCGATCACGGTATGATGCTGCTGATATTTTCC GCCTTTATGCTGCGTTATTTCGGCAAAACTGCGGGGATTATCGCCCTTATTATATTTGTGGTTTTCGCGTTTCCGCGCGT TATGATTGGCGCTCACTGGTTCACCGATATTGTGGTCGGGTCGCTCACGGTTATTTTGATTGGCCTCCCCTGGTGGCTGA TGACCCCGCTCAGCGACCGGGCGATAGCGCTTTTTGAGAATTATCTCCCGGGCGGAAATAAACAAATTTTAAACAAATAA
Upstream 100 bases:
>100_bases CAAACACAGAAACCGACTGGAATACGTTACAGACGGCCTTGTTGAAGCTTCGTTTAGCGACGCACGCGTAAGGTTGCCAC CGTTTAAAAACTATGGCGAA
Downstream 100 bases:
>100_bases CCTATGTAATTAACATTACCTTCAGCGATAGTTTTACATCGTTGAAGGTAATTTATGATGATATTCCCCCAGCCCATCAT TTTTCGGTCATATTATTCCT
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFNQKLVESHAFLWWVAITNNRAFDGCSLLAMGGLMLS FWLKENASGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFS AFMLRYFGKTAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAIALFENYLPGGNKQILNK
Sequences:
>Translated_239_residues MTMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFNQKLVESHAFLWWVAITNNRAFDGCSLLAMGGLMLS FWLKENASGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFS AFMLRYFGKTAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAIALFENYLPGGNKQILNK >Mature_238_residues TMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFNQKLVESHAFLWWVAITNNRAFDGCSLLAMGGLMLSF WLKENASGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFSA FMLRYFGKTAGIIALIIFVVFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAIALFENYLPGGNKQILNK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI87082062, Length=230, Percent_Identity=83.4782608695652, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 26922; Mature: 26791
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFNQKLVESHAFLWWVAI CCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEE TNNRAFDGCSLLAMGGLMLSFWLKENASGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRA ECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHCC SPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFSAFMLRYFGKTAGIIALIIFV CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH VFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAIALFENYLPGGNKQILNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure TMKTRYSLIILLNAAGLALFLSWYLPVNHGFWFTIDSGIFHFFNQKLVESHAFLWWVAI CCCCEEEEEEEEEHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEEEE TNNRAFDGCSLLAMGGLMLSFWLKENASGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRA ECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHCC SPTLSFEHIYRVSELLHIPTKDASKDSFPGDHGMMLLIFSAFMLRYFGKTAGIIALIIFV CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH VFAFPRVMIGAHWFTDIVVGSLTVILIGLPWWLMTPLSDRAIALFENYLPGGNKQILNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]