Click here to switch to the map view.

The map label for this gene is ykgH [C]

Identifier: 16765538

GI number: 16765538

Start: 2308969

End: 2309634

Strand: Reverse

Name: ykgH [C]

Synonym: STM2208

Alternate gene names: 16765538

Gene position: 2309634-2308969 (Counterclockwise)

Preceding gene: 16765539

Following gene: 16765536

Centisome position: 47.55

GC content: 38.44

Gene sequence:

>666_bases
ATGCGGGGAGAAAATAGTGAAATTGATTTAGTCGACGTTTCCTTATTCCTTATAAGAAAATGGCTAAGTATCATGATCGC
TACCTTTATTTTTGTTGCCATTGGCTATGTTTTTGTGAGCGTGCAGCATGATACAAAGGTTGTGAGTATGACAATCAAAC
CTAATCTGGATACGCCTGCTACCTATGCGTTATGTGGCTATACTAATGATATTCAATGTAAAACAACGGTTATCCTTAAC
CAGTTTAGCCGTTTCTTGCCTGCGGAATATAAAAATAAAATAAGTTTTGACGCGAAAAATCAGCTTGTTCTTTTTAAGGC
GCAGGGGAGGGAAGAAAGCGTCAATAATATTATTTCCACCCTGAAAAATAGTGTCGATAAAATGGCGGCATGGTATATCG
ATGATGGTGACATTAAACGTTATAGCGTGCATAAAAATATGTTACAAACGGAAACATATGCAAAGCTATCCTTGTTGTCG
GAGGCGGTTAAAAATAATGCTAACATTGAAGTGATAGATGTTGCTGTCACACCAAAATATAAGATGCGGCTGGTGTTGGT
TCTTTGCGGACTGATGGGCGTAATTTTCTCAATAACCGGTCTCTTATGTAAGAGGGCGCTAACAGAATATCGTATTGAGA
AAAAGACAATGAATGACCGCGCATGA

Upstream 100 bases:

>100_bases
AAATATACGTTCGCAGCCAGGGCGTTTATTTTTACGCTGGTGTTGCTTTTTGTTATTTCAGTATTCGGGTTGACTATTAG
CGTTTTAAAAGGGATGTGAA

Downstream 100 bases:

>100_bases
ACATTGCGCAGAGATAAACTCTGCGCTGAAATGTGTCGAAGAGTAAAAGTATCAGGCTTGCAAGTTAAACATCTTTAATA
CGCGCCAGGCAGAACATGGT

Product: inner membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRGENSEIDLVDVSLFLIRKWLSIMIATFIFVAIGYVFVSVQHDTKVVSMTIKPNLDTPATYALCGYTNDIQCKTTVILN
QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYAKLSLLS
EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA

Sequences:

>Translated_221_residues
MRGENSEIDLVDVSLFLIRKWLSIMIATFIFVAIGYVFVSVQHDTKVVSMTIKPNLDTPATYALCGYTNDIQCKTTVILN
QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYAKLSLLS
EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA
>Mature_221_residues
MRGENSEIDLVDVSLFLIRKWLSIMIATFIFVAIGYVFVSVQHDTKVVSMTIKPNLDTPATYALCGYTNDIQCKTTVILN
QFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIISTLKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYAKLSLLS
EAVKNNANIEVIDVAVTPKYKMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25069; Mature: 25069

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGENSEIDLVDVSLFLIRKWLSIMIATFIFVAIGYVFVSVQHDTKVVSMTIKPNLDTPA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCC
TYALCGYTNDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIIST
EEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
LKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYAKLSLLSEAVKNNANIEVIDVAVTPKY
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH
KMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRGENSEIDLVDVSLFLIRKWLSIMIATFIFVAIGYVFVSVQHDTKVVSMTIKPNLDTPA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCC
TYALCGYTNDIQCKTTVILNQFSRFLPAEYKNKISFDAKNQLVLFKAQGREESVNNIIST
EEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
LKNSVDKMAAWYIDDGDIKRYSVHKNMLQTETYAKLSLLSEAVKNNANIEVIDVAVTPKY
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCH
KMRLVLVLCGLMGVIFSITGLLCKRALTEYRIEKKTMNDRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA