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The map label for this gene is yehY [H]

Identifier: 16765494

GI number: 16765494

Start: 2258902

End: 2260071

Strand: Reverse

Name: yehY [H]

Synonym: STM2164

Alternate gene names: 16765494

Gene position: 2260071-2258902 (Counterclockwise)

Preceding gene: 16765495

Following gene: 16765493

Centisome position: 46.53

GC content: 59.66

Gene sequence:

>1170_bases
GTGAGTGATGCTGCCAAAAAAATCACGGTTAATCGTGTGCTGTTGCTGTTGGTTGTTCTGACCTTGCTTGCTGTCGCGCT
GCCTTTCATTAATTACGCCCCGAATCGTCTGGTGAGCGGCGAGGGGCGCCAGTTATGGGAGATCTGGCCGGCGACCATCT
GGATGCTGACTGGCGCGGGATGCGCGCTGTTTACGCTGTGCTTTGTACCCGGTAAACGCGGTAGCGTACTGACGCTGATG
ATGGCGCAGACGCTTTTTATTGTCATGCTGTGGGGAGTCGGCAGGGCGGCGACCCAGTTGGCGCAGGAGGGCAGCCCGCT
GGCGCGTACCAGTCTGGGAAGTGGATTGTGGCTGGGCCTCGGTCTGATGTTGCTGGCCTGTAGCGATGCGATCCGCCGTA
TTACCACTGGGCCGCTGTGGCGCTGGTTGCTGCACGCGCAAATTGTCATTGTCCCGCTGGCGCTGCTGTTTTCAGGCACG
TTCGACAACCTCTCGCTTCTGAAAGAGTATACCAACCGCCAGGATGTTTTCGATGCCGCGCTGGTGCAACATTTGATGTT
ACTGGCGGGCACGGTGCTGCCGGCGCTGGCGATCGGATTACCGTTGGGCGTCTGGTGTTATTTTTCCGCCTCGCGCCAGG
GGCCGGTGTTTACCGTACTGAATGTGATCCAGACTATCCCTTCCGTCGCGCTGTTTGGCCTGCTGATCGCGCCGTTGGCC
GGGCTGGTGAAACAGTTTCCGTGGCTTGCCGCATTCGGCGTCGCGGGAACCGGCATGACGCCTGCGCTGATAGCTCTGGT
GCTCTATGCGTTATTGCCGCTGGTGCGCGGCGTGGTCGCCGGGCTCAATCAGGTGCCGCGCGATGTGCTGGAGAGCGCAA
GAGCCATGGGAATGAGTAGCGGCCAGCGCTTCAGGCATGTGCAACTGCCGCTGGCGCTGCCGGTCTTTTTACGTAGCCTG
CGGGTAGTAATGGTCCAGACAGTGGGAATGGCCGTCGTCGCCGCGCTGATTGGCGCGGGAGGTTTCGGCGCGCTGGTGTT
TCAGGGGCTATTGAGCAGCGCCATTGATTTAGTCCTGTTGGGCGTCATTCCGGTGATTGCGTTGGCGGTAGTGATCGACG
CGCTGTTTGATTTATGGATCGCGTTTCTGAAGGGAGCAACCGATGATTGA

Upstream 100 bases:

>100_bases
AACGCTGCAACAGTTGAACGCCAGAATCGCCGTAGAAGGGCTGGATGCGAAAAAAGTCGCCGCAGATTACCTCCGACAAA
AAGGGTGGGTGAAGTAATCT

Downstream 100 bases:

>100_bases
ATTTAACCATGTCAGTAAAACCTTCGGCGATCAACAGGCTGTTAGCGACCTCAATTTGCATTTTAGCGAAGGCAGCTTTT
CGGTGTTAATTGGCACCTCC

Product: ABC-type proline/glycine betaine transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSDAAKKITVNRVLLLLVVLTLLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLM
MAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITTGPLWRWLLHAQIVIVPLALLFSGT
FDNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA
GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSL
RVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD

Sequences:

>Translated_389_residues
MSDAAKKITVNRVLLLLVVLTLLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLM
MAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITTGPLWRWLLHAQIVIVPLALLFSGT
FDNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA
GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSL
RVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD
>Mature_388_residues
SDAAKKITVNRVLLLLVVLTLLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLMM
AQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITTGPLWRWLLHAQIVIVPLALLFSGTF
DNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAG
LVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLR
VVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=362, Percent_Identity=77.6243093922652, Blast_Score=555, Evalue=1e-159,
Organism=Escherichia coli, GI1788449, Length=224, Percent_Identity=33.0357142857143, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789033, Length=180, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41423; Mature: 41292

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDAAKKITVNRVLLLLVVLTLLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCH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HHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]