| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yehR [C]
Identifier: 16765486
GI number: 16765486
Start: 2252643
End: 2253173
Strand: Direct
Name: yehR [C]
Synonym: STM2156A
Alternate gene names: 16765486
Gene position: 2252643-2253173 (Clockwise)
Preceding gene: 16765485
Following gene: 16765490
Centisome position: 46.38
GC content: 40.68
Gene sequence:
>531_bases ATGCAGGTTCTACGTCTTATGGCACTGCCACTATTCGCGCTCTCTCTATCGGTTAGCATAACTGGCTGCGATCAGAAAAA CGATACTCTCCAGGGAAAGCAAAATAACATGACAGCGTTTATCAAGAAGATAGCCGCTAGCAAAGAGTCAGAGGAAACAC AACGCTATGTAGGTAATCTCAACGGTATTGAAATCAAGTTAACCTATTACTACAAAGGGGATATCGTTTTACGTCAAATA TCTGAACATAAACTACTTTATAAGACCCTGAAAGCCAATAATAAAGAAGAAGCACAAAAAATGCTGAGTCAAGTCGGCGA AGCTTATCAGGGTATGCCGGGTTTGACTGAACGAATCGACTATTATGATAGCTATGCTACGGAATATGTGGATATTAATT TTACCCAGGCAAAAATAAGCGACCTCTGTAAATTGCCAGGATCATCAATTGACAACTGTTCCGCGTACTATCTGTCAATG ATTCGCTCGCAGAAACTGCTGGAAGAGAGCGGATATCATAGAATCAATTAG
Upstream 100 bases:
>100_bases ATGAATTCCGAAAAAAGACAGCCTCGCTGTAAGTCCCCTCGCCAAAGCCTATAATCCCTGAATTCTTGGCCACACCAATA CTTAACGACAAGGAATTGTT
Downstream 100 bases:
>100_bases TATAATAATGCGTTTTCCCGGTCAGACAGGACGCTGCCGGGAACAATACCGCAGAATTACTTCGCCGCGTGTTCACGGGC TGCCAGACCGCGCAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIAASKESEETQRYVGNLNGIEIKLTYYYKGDIVLRQI SEHKLLYKTLKANNKEEAQKMLSQVGEAYQGMPGLTERIDYYDSYATEYVDINFTQAKISDLCKLPGSSIDNCSAYYLSM IRSQKLLEESGYHRIN
Sequences:
>Translated_176_residues MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIAASKESEETQRYVGNLNGIEIKLTYYYKGDIVLRQI SEHKLLYKTLKANNKEEAQKMLSQVGEAYQGMPGLTERIDYYDSYATEYVDINFTQAKISDLCKLPGSSIDNCSAYYLSM IRSQKLLEESGYHRIN >Mature_176_residues MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIAASKESEETQRYVGNLNGIEIKLTYYYKGDIVLRQI SEHKLLYKTLKANNKEEAQKMLSQVGEAYQGMPGLTERIDYYDSYATEYVDINFTQAKISDLCKLPGSSIDNCSAYYLSM IRSQKLLEESGYHRIN
Specific function: Unknown
COG id: COG4808
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yehR [H]
Homologues:
Organism=Escherichia coli, GI87082051, Length=136, Percent_Identity=33.8235294117647, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009736 [H]
Pfam domain/function: PF06998 DUF1307 [H]
EC number: NA
Molecular weight: Translated: 20021; Mature: 20021
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIAASKESEETQRYVGNL CHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC NGIEIKLTYYYKGDIVLRQISEHKLLYKTLKANNKEEAQKMLSQVGEAYQGMPGLTERID CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH YYDSYATEYVDINFTQAKISDLCKLPGSSIDNCSAYYLSMIRSQKLLEESGYHRIN HHHHHHHHEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQVLRLMALPLFALSLSVSITGCDQKNDTLQGKQNNMTAFIKKIAASKESEETQRYVGNL CHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC NGIEIKLTYYYKGDIVLRQISEHKLLYKTLKANNKEEAQKMLSQVGEAYQGMPGLTERID CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH YYDSYATEYVDINFTQAKISDLCKLPGSSIDNCSAYYLSMIRSQKLLEESGYHRIN HHHHHHHHEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1309513; 11679669 [H]