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The map label for this gene is erfK

Identifier: 16765345

GI number: 16765345

Start: 2096296

End: 2097225

Strand: Reverse

Name: erfK

Synonym: STM2015

Alternate gene names: 16765345

Gene position: 2097225-2096296 (Counterclockwise)

Preceding gene: 16765346

Following gene: 16765344

Centisome position: 43.18

GC content: 52.47

Gene sequence:

>930_bases
ATGCGTCGTATCACACCTTTTTTTCCGTTTTTCGTCTTGTTGGTAAGCCATTTCTCGCTGGCTATAAGCTATCCGTTGCC
GCCCGAAGGCAGTCGTCTGGTAGGACAGCCTGTCACAATCGCCGTACCGCAGAACAATACTCAGCCCTTAGAGTCATTTG
CCGCCCGCTACGGTCAAGGGCTGAGTAATATGCTTGAAGCGAATCCCGGCGTGGATGTGTTTTTACCTCAGTCTGGTTCC
ACACTGGTGGTGCCGCAGCAGTTGATTCTGCCTGACACCGTTCGTGAAGGTATTGTGGTAAACGTCGCCGAGATGCGCCT
TTATTATTATCCCGCAGGCACGAATACGGTTGAGGTGCTACCTATTGGTATTGGTCAGGCTGGCCGTGAAACGCCGCGCA
ACTGGGTAACTGCGGTTGAACGCAAACAAGATGGCCCGGTTTGGGTGCCAACGGCTAATACGCGTCGGGAATATGCTAAA
GAGGGAAAAACGCTGCCCGCGATGGTGCCTGCGGGGCCGGATAACCCTATGGGGCTATACGCAATATATATCGGCAGGTT
ATATGCCATCCATGGCACTAACGCTAACTTTGGCATTGGCCTTCGCGTCAGTCAGGGCTGTATCCGTTTACGCAATGACG
ATATTAAATATTTATTCGACCATGTTCCTGTAGGAACCCGCGTTCAGATTATCGACAGGCCCGTTAAATTTTCGGTAGAG
CCGGATGGCAGTCGTTGGCTGGAGGTACACGAACCGCTTTCTCGCAACCGTGCTGAATTTGAGTCAGACAAAAAAGTTCC
ATTGCCCGTTACGCCAGTGCTGCGCACGTTTATCAAAGGGGATGACGTTGATACTTCGCGGGTTAATGAGGTGCTGGAGC
GCCGTTCCGGAATGCCGGTCAACATTAGCGCGGGCAGGCCTGGCCTTTAA

Upstream 100 bases:

>100_bases
AGGGGAACGCAAACGCAACATAACCCGGGCGCACAACACCAGCCATGTGAGAAAAAAGCTATACTTAACGCACACCTGCC
GCGACAAAGGAAGGGATATA

Downstream 100 bases:

>100_bases
ATATCCTGTCGCATTGCTGGTTTTCATGGGCTGGAGTATCTGTATTAGTAGTGAGTGTCATGGCAGGGGCTCCATTTTCT
CAGCGAACCGTGAGGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRPGL

Sequences:

>Translated_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRPGL
>Mature_309_residues
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQGLSNMLEANPGVDVFLPQSGS
TLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAK
EGKTLPAMVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRPGL

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family

Homologues:

Organism=Escherichia coli, GI1788299, Length=305, Percent_Identity=79.672131147541, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1787040, Length=294, Percent_Identity=64.6258503401361, Blast_Score=399, Evalue=1e-112,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.8245614035088, Blast_Score=275, Evalue=3e-75,
Organism=Escherichia coli, GI1787968, Length=304, Percent_Identity=45.0657894736842, Blast_Score=237, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ERFK_SALTY (P40680)

Other databases:

- EMBL:   L35477
- EMBL:   AE006468
- RefSeq:   NP_460960.1
- ProteinModelPortal:   P40680
- SMR:   P40680
- PRIDE:   P40680
- GeneID:   1253536
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2015
- HOGENOM:   HBG295778
- OMA:   ERALYLS
- ProtClustDB:   PRK10190
- BioCyc:   STYP99287:STM2015-MONOMER
- InterPro:   IPR005490

Pfam domain/function: PF03734 YkuD

EC number: NA

Molecular weight: Translated: 34181; Mature: 34181

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRPGL
EECCCCCCC
>Mature Secondary Structure
MRRITPFFPFFVLLVSHFSLAISYPLPPEGSRLVGQPVTIAVPQNNTQPLESFAARYGQG
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGVDVFLPQSGSTLVVPQQLILPDTVREGIVVNVAEMRLYYYPAGTNTVEVL
HHHHHHCCCCCEEEECCCCCEEECCHHHCCCHHHHCCEEEEEEEEEEEEEECCCCEEEEE
PIGIGQAGRETPRNWVTAVERKQDGPVWVPTANTRREYAKEGKTLPAMVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDHVPVGTRVQIIDRPVKFSVE
EEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCCEEEEEECCEEEEEC
PDGSRWLEVHEPLSRNRAEFESDKKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPV
CCCCCEEEECCCHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE
NISAGRPGL
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883701; 11677609