| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is amn [H]
Identifier: 16765341
GI number: 16765341
Start: 2091307
End: 2092761
Strand: Reverse
Name: amn [H]
Synonym: STM2009
Alternate gene names: 16765341
Gene position: 2092761-2091307 (Counterclockwise)
Preceding gene: 16765343
Following gene: 16765335
Centisome position: 43.08
GC content: 54.16
Gene sequence:
>1455_bases ATGGAAAATAAAGGCACAAACCTAACGCCCGAGCAGGCGCTGGATCGCCTGGAGGAGCTATACGAGCAGTCGGTTAACGC GCTCCGTGAAGCCATCGCTGACTATGTTGATAACGGTACGCTGCCCGATCCCCACGCCAGGCTTAACGGACTGTTTGTTT ATCCTTCGCTGTCTGTAAGCTGGGATGGCGCGACACCGAACCCGCCTAAAACACGCGCTTTTGGACGCTTTACTCATCCC GGCTGTTATACCACTACCGTTACGCGGCCTGCGCTATTTCGCGCTTATCTTCTGGAACAGCTTAACCTCGTTTACCATGA TTATGGCGCGCATATTGCGGTAGAGGCCTCGCACCATGAGATCCCGTATCCTTATGTGATCGATGGCTCGGCTCTGACGC TGGATCGTTCTATGAGCGCCGGGCTAACGCGCCATTTTCCTACCACAGAACTGGCGCAGATTGGCGATGAGACGGCAGAC GGTCTGTTCCACCCCGGCGAATTCTATCCGCTATCGCACTTCGACGCGCGTCGTGTTGACTTCTCGTTGGCCCGGTTACG GCACTATACCGGTACGCCGGTTGAACATTTTCAGCCCTTCGTTTTGTTTACCAACTACACCCGCTATGTCGATGAGTTTG TGCGCTGGGGATGCAGCCAAATTCTTGATCCTGACAGTCCCTATATCGCGCTTTCCTGTGCCGGCGGAATTTGGATCACG GCAGAAACGGAAGCGCCGGAAGAGGCTATTTCCGATCTGGCCTGGAAGAAGCATCAGATGCCCGCCTGGCACCTGGTAAC GGCAGATGGGCAGGGGATTACGCTGGTAAATATCGGTGTCGGCCCTTCAAATGCTAAAACGATTTGCGACCATTTGGCCG TGTTGCGGCCTGACGTCTGGCTTATGATTGGGCACTGTGGAGGGTTACGAGAAAGTCAGGCGATTGGTGATTATGTGCTG GCCCATGCCTACTTACGCGATGATCATGTGCTGGATGCCGTTCTGCCGCCTGATATTCCTATTCCAAGCATTGCGGAAGT ACAGCGTGCGCTGTACGACGCCACCAAAGCGGTTAGCGGAATGCCCGGTGAAGAGGTGAAACAGCGACTGCGCACGGGAA CGGTCGTCACCACGGATGATCGTAACTGGGAGCTTCGTTATTCCGCATCGGCGCTGCGATTCAACCTTAGCCGCGCGGTC GCGATTGATATGGAGAGCGCGACGATTGCAGCCCAGGGCTATCGCTTCCGCGTGCCTTACGGCACGCTGCTTTGTGTTTC TGACAAACCTTTACACGGTGAAATTAAACTGCCCGGGCAGGCAAACCGGTTTTATGAGGGGGCTATTTCAGAACATTTGC AAATTGGTATTCGTGCTATTGATTTACTACGCGCAGAAGGTGATCGTTTGCACTCACGTAAATTACGCACGTTTAATGAG CCACCGTTTCGCTAA
Upstream 100 bases:
>100_bases TGTTTACTGTCGCCACCCTTACGCTAACCCCTTTAGTTTCCTCCTTTGCTGTCATACTATCGAATGACGTGCCTCACCTG TGAACGCTAAGGAGAATAAT
Downstream 100 bases:
>100_bases CGAAATGAGCTGTCGCCTGCTGCTGGACAGGAGCGGAAGAGGCGTATTTATGTGATATGGAAAGTGGCTGAATGAAGCCT TAGCGGGAGGCGGTTCTGTA
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDPHARLNGLFVYPSLSVSWDGATPNPPKTRAFGRFTHP GCYTTTVTRPALFRAYLLEQLNLVYHDYGAHIAVEASHHEIPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETAD GLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT AETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVL AHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSGMPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAV AIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR
Sequences:
>Translated_484_residues MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDPHARLNGLFVYPSLSVSWDGATPNPPKTRAFGRFTHP GCYTTTVTRPALFRAYLLEQLNLVYHDYGAHIAVEASHHEIPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETAD GLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT AETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVL AHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSGMPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAV AIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR >Mature_484_residues MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDPHARLNGLFVYPSLSVSWDGATPNPPKTRAFGRFTHP GCYTTTVTRPALFRAYLLEQLNLVYHDYGAHIAVEASHHEIPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETAD GLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT AETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVL AHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSGMPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAV AIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=484, Percent_Identity=90.495867768595, Blast_Score=913, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 54005; Mature: 54005
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDPHARLNGLFVYPSLSVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEECCEEEE WDGATPNPPKTRAFGRFTHPGCYTTTVTRPALFRAYLLEQLNLVYHDYGAHIAVEASHHE ECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCC IPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETADGLFHPGEFYPLSHFDARRVD CCCCEEECCCEEEECCCHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHH FSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT HHHHHHHHCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEE AETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVW ECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSG EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC MPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY CCHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEECCEEEEEEECCCEEEECCEEEECCC GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE CEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PPFR CCCC >Mature Secondary Structure MENKGTNLTPEQALDRLEELYEQSVNALREAIADYVDNGTLPDPHARLNGLFVYPSLSVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEECCEEEE WDGATPNPPKTRAFGRFTHPGCYTTTVTRPALFRAYLLEQLNLVYHDYGAHIAVEASHHE ECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCC IPYPYVIDGSALTLDRSMSAGLTRHFPTTELAQIGDETADGLFHPGEFYPLSHFDARRVD CCCCEEECCCEEEECCCHHCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHH FSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT HHHHHHHHCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEE AETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVW ECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCEE LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSG EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC MPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY CCHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEECCEEEEEEECCCEEEECCEEEECCC GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE CEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PPFR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]