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The map label for this gene is yedJ [H]

Identifier: 16765329

GI number: 16765329

Start: 2075833

End: 2076528

Strand: Reverse

Name: yedJ [H]

Synonym: STM1993

Alternate gene names: 16765329

Gene position: 2076528-2075833 (Counterclockwise)

Preceding gene: 16765330

Following gene: 16765328

Centisome position: 42.75

GC content: 54.89

Gene sequence:

>696_bases
ATGGACTCAGGATACTGGCAATCGCAGTTTGAAGACTGGCTACGTCACCACCATCAGGAACAGGATGCCGCCCATGACAT
CTTCCATTTTCGTCGTGTTTGGGCAACCGCGCAAACGCTGGGGGAAAACAGTCCTGTCGACTGGCTGGTGGTGCTATCGG
CATGTTATTTCCATGACATCGTCAGCCTGGCGAAAAATCATCCGCAGCGGCATCGTTCTTCCATTCTGGCGGCGGCAGAA
ACCCGGCGTATTTTTCTGCGGGATTTTCCTGACTTTCCGGCAGAAAAACTGGCGGGCATTTGTCATGCTATCGAAGCGCA
TAGCTTCAGCGCAAAAATTGCGCCTACCACGCCAGAGGCAAAAATCGTGCAGGATGCAGACAGGCTGGAGGCGTTGGGCG
CCATTGGTCTGGCGCGGGTCTTCGCGGTCTCCGGCGCGCTGGGCGTCGCGTTATTTGATGCCGACGATCCCTTTGCCGAC
AGACGGCCTCTTAACGATAAGCAATTCGCGCTCGACCATTTTCAAACCAAACTGCTGAAACTGCCGCTGACGATGCAGAC
CGAACGGGGCAAGTACCTGGCGCAGCGTAATGCGGATTTTCTGGTGTCGTACATGGCGAAACTGAGCGCTGAGCTGAAAG
GCGACTATGAAACACGGGATGATGCGGTCATCCAGATGTTTGCTACGCATCAGTAA

Upstream 100 bases:

>100_bases
CGCAAGTAAGCAGGGATGTAAAGTGGTGGCGGATATGTCAGGATAGCGAACCCTGTGCTCAGGCATGTAATAAAAATGGT
CTGCTATAAAGAGAGGGCGT

Downstream 100 bases:

>100_bases
CCCCTGTCGCTGAAACGTAAACCGCGTCATTTTATGTTAGTCTGTCGGCAATTATTTTTGGCCGGTTAAATGTATGCAGG
AAAATATTTCAGTAACACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAD
RRPLNDKQFALDHFQTKLLKLPLTMQTERGKYLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATHQ

Sequences:

>Translated_231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAD
RRPLNDKQFALDHFQTKLLKLPLTMQTERGKYLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATHQ
>Mature_231_residues
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDIVSLAKNHPQRHRSSILAAAE
TRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFAD
RRPLNDKQFALDHFQTKLLKLPLTMQTERGKYLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATHQ

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=229, Percent_Identity=73.3624454148472, Blast_Score=345, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26175; Mature: 26175

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSLAKNHPQRHRSSILAAAETRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFADRRPLNDKQFALDHFQTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LPLTMQTERGKYLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATHQ
CCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDSGYWQSQFEDWLRHHHQEQDAAHDIFHFRRVWATAQTLGENSPVDWLVVLSACYFHDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSLAKNHPQRHRSSILAAAETRRIFLRDFPDFPAEKLAGICHAIEAHSFSAKIAPTTPEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDADDPFADRRPLNDKQFALDHFQTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LPLTMQTERGKYLAQRNADFLVSYMAKLSAELKGDYETRDDAVIQMFATHQ
CCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]