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The map label for this gene is fliH

Identifier: 16765309

GI number: 16765309

Start: 2059202

End: 2059909

Strand: Direct

Name: fliH

Synonym: STM1971

Alternate gene names: 16765309

Gene position: 2059202-2059909 (Clockwise)

Preceding gene: 16765308

Following gene: 16765310

Centisome position: 42.39

GC content: 60.45

Gene sequence:

>708_bases
ATGTCTAATGAATTGCCGTGGCAAGTCTGGACCCCCGACGATCTCGCCCCGCCGCCAGAAACTTTTGTGCCGGTTGAGGC
TGATAACGTGACCTTGACAGAAGATACGCCGGAGCCCGAACTCACTGCCGAACAGCAGCTGGAGCAGGAGCTGGCGCAGC
TAAAAATACAGGCCCATGAACAAGGTTATAACGCCGGGCTGGCGGAGGGACGGCAAAAAGGACACGCGCAGGGATACCAG
GAAGGGTTAGCGCAGGGGCTGGAGCAAGGACAAGCCCAGGCGCAGACGCAGCAGGCGCCGATTCATGCCCGTATGCAGCA
GTTAGTGAGCGAGTTTCAGAACACGCTTGACGCGCTCGATAGCGTTATCGCCTCACGGCTGATGCAAATGGCCCTGGAGG
CCGCACGTCAGGTCATCGGCCAAACGCCGGCGGTGGACAACTCAGCGCTGATTAAACAGATCCAACAACTGTTGCAGCAA
GAGCCGCTCTTTAGCGGCAAGCCGCAGTTGCGCGTGCATCCGGACGACTTACAGCGGGTGGAAGAGATGCTGGGCGCCAC
GCTCAGTCTTCACGGATGGCGGTTACGCGGCGATCCAACGTTGCATCACGGCGGGTGTAAAGTCTCTGCCGATGAGGGCG
ATCTGGACGCCAGCGTCGCCACTCGCTGGCAAGAGTTGTGTCGCCTGGCGGCGCCGGGAGTGCTCTGA

Upstream 100 bases:

>100_bases
CGTCTGTCTCAGGTGGAAAACGAGCAGAAAGCGATTCTGCTTATTGTGCGTCGTCTGGCGGAAACCGGCGAAATGGTGAT
TGGCAGCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
TGACCACGCGCCTGACCCGCTGGCTTACCGCGCTCGACAACTTTGAAGCCAAAATGGCGTTATTGCCGGCGGTGCGTCGT
TATGGACGTTTAACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQ
EGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL

Sequences:

>Translated_235_residues
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQ
EGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQ
EPLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
>Mature_234_residues
SNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQELAQLKIQAHEQGYNAGLAEGRQKGHAQGYQE
GLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQE
PLFSGKPQLRVHPDDLQRVEEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL

Specific function: Needed for flagellar regrowth and assembly

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family

Homologues:

Organism=Escherichia coli, GI87082004, Length=235, Percent_Identity=82.1276595744681, Blast_Score=345, Evalue=1e-96,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIH_SALTY (P15934)

Other databases:

- EMBL:   M62408
- EMBL:   AE006468
- EMBL:   M24462
- PIR:   B42364
- RefSeq:   NP_460924.1
- PRIDE:   P15934
- GeneID:   1253492
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1971
- HOGENOM:   HBG504712
- OMA:   GCRAHAA
- ProtClustDB:   PRK05687
- BioCyc:   STYP99287:STM1971-MONOMER
- GO:   GO:0005737
- InterPro:   IPR000563
- InterPro:   IPR018035
- PRINTS:   PR01003

Pfam domain/function: PF02108 FliH

EC number: NA

Molecular weight: Translated: 25811; Mature: 25680

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQELAQLKIQAHE
CCCCCCCEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHH
EEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
HHHHCCHHHHCCEEECCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNELPWQVWTPDDLAPPPETFVPVEADNVTLTEDTPEPELTAEQQLEQELAQLKIQAHE
CCCCCCEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
QGYNAGLAEGRQKGHAQGYQEGLAQGLEQGQAQAQTQQAPIHARMQQLVSEFQNTLDALD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHH
EEMLGATLSLHGWRLRGDPTLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVL
HHHHCCHHHHCCEEECCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646201; 11677609; 2656645