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The map label for this gene is yesR [H]

Identifier: 16765253

GI number: 16765253

Start: 2006444

End: 2007583

Strand: Reverse

Name: yesR [H]

Synonym: STM1911

Alternate gene names: 16765253

Gene position: 2007583-2006444 (Counterclockwise)

Preceding gene: 16765254

Following gene: 16765250

Centisome position: 41.33

GC content: 52.63

Gene sequence:

>1140_bases
ATGATGGTTTATCCAGTCAAACACAGTCCGCTATTGCGTCAGCCTGAGCATTTTATCGCCAGAGATGAACTAAAAGCCCT
GGTGCAAAAGGTGACGCATAACCTGGTCAATATTAAAGATGAGACAGGCGAATTTTTATTGCGACTGGACGACGGACGCG
TGATCGATACTAAAGGCTGGGCCGGATGGGAGTGGACGCACGGCGTGGGCCTGTACGGAATGTATCACTATTACCAACAG
ACCGGCGACCAGACGATGCGTAAGATCATTGATGACTGGTTTGCCGATCGTTTTGCGGAAGGCGCGACGACGAAAAACGT
TAATACGATGGCGCCGTTTTTAACGCTGGCGTATCGCTATGAAGAGACGCGTAATCCAGCGTATTTACCGTGGCTGGAAA
CGTGGGCCGAATGGGCGATGAATGAAATGCCCCGTACCGATCACGGCGGAATGCAGCACATCACGCTGGCGGAGGAAAAT
CATCAGCAGATGTGGGACGACACGCTAATGATGACGGTGCTGCCGCTGGCGAAAATCGGTAAACTGTTGAACCGGCCGGA
ATACGTGGAAGAGGCAACCTATCAGTTCCTGCTGCACGTGCAGAATTTGATGGATAAAGAGACGGGGCTGTGGTTCCACG
GCTGGAGCTATGACGGTCATCATAACTTCGCTAACGCTCGCTGGGCGCGCGGCAACAGCTGGCTGACCATTGTGATCCCG
GATTTTCTTGAACTGCTGGACTTGCCGGAAAATAATGCCGTGCGCCGTTATCTGGTCCAGGTACTGAATGCGCAGATCGC
CGCGCTGGCGAAATGTCAGGATGAAAGCGGTTTGTGGCATACGCTGCTTGACGATCCGCACTCTTATCTTGAGGCGTCGG
CGACGGCGGGTTTTGCCTACGGTATTCTTAAAGCGGTGCGCAAACGCTATGTCGAACGGCACTATGCGCAGGTGGCGGAA
AAAGCTATTCGGGGGATAGTGAAACATATCTCGCCGGAAGGTGAACTGCTGCAAACGTCATTTGGCACTGGCATGGGCCA
CGATCTCGATTTTTACCGTCATATTCCGTTGACCTCTATGCCTTACGGGCAGGCGATGGCAATGCTGTGTTTGACGGAAT
ATCTGCGTAACTATTTCTGA

Upstream 100 bases:

>100_bases
AAGGTTTCCGCCCAGCTTAGCTTTTACTGTAGCGAATCGACTGCGTCGGCGGTAAAACTGCACGCAGCACTGAATTCGAC
ATTACACAGAGGTTAAGCAA

Downstream 100 bases:

>100_bases
TGTATGCAGATATTCCGGCCGTATCCTTGTCTGATGGCGCTTTGCTTATTTGACTATGGCGCCTGATCCGGCTGTGTGGT
ATCAGCCTGTGGATCAAACA

Product: cytoplasmic protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQ
TGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDHGGMQHITLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVIP
DFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAE
KAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF

Sequences:

>Translated_379_residues
MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQ
TGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDHGGMQHITLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVIP
DFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAE
KAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF
>Mature_379_residues
MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQ
TGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDHGGMQHITLAEEN
HQQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVIP
DFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAE
KAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 44002; Mature: 44002

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGW
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCC
AGWEWTHGVGLYGMYHYYQQTGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EETRNPAYLPWLETWAEWAMNEMPRTDHGGMQHITLAEENHQQMWDDTLMMTVLPLAKIG
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
KLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCCEEEEEHH
DFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHH
GILKAVRKRYVERHYAQVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCHHHHCCCCCCC
PYGQAMAMLCLTEYLRNYF
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGW
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCC
AGWEWTHGVGLYGMYHYYQQTGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EETRNPAYLPWLETWAEWAMNEMPRTDHGGMQHITLAEENHQQMWDDTLMMTVLPLAKIG
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
KLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCCEEEEEHH
DFLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHH
GILKAVRKRYVERHYAQVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCHHHHCCCCCCC
PYGQAMAMLCLTEYLRNYF
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]