| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16765238
Identifier: 16765238
GI number: 16765238
Start: 1991104
End: 1992000
Strand: Direct
Name: 16765238
Synonym: STM1896
Alternate gene names: NA
Gene position: 1991104-1992000 (Clockwise)
Preceding gene: 16765235
Following gene: 16765239
Centisome position: 40.99
GC content: 44.59
Gene sequence:
>897_bases ATGGCCATTGAGCAACAAGCTATCGCCTATACTGTCAGCCAAAAGTGGGACAAGCTGGACGCTATGTTTCAGGAATACAA TACCGGATTCCCGACAACCAGCGGCGGAACTCATAAACTGGTTATCGCATGGGGAGGGATCTATAATCTTTTTTCAGTAG ATGTTTCCGACAATGGTATTTCTGGCGTGGCAAAAGAGTGGCTTAAAGCAAACCCCAAATCCACGGGTGCAAGGCTGCTG CAAGCAATGGTTTTTGATGCTAAAGCCGTGAATTTACGCGGTGAAGGTGCGGCCAGCACGGTGGACTCTGATATATGGCC GAAATATAAAAAGCTGATGATTCAGGAAAAAGAGTATCTGTTAAAGAACAAAGATATTGCCGACAAAGATGTGACCTGGT ATCAGGAAATGGAAATGGTCGCACGCAATCTTGAGGATAAAGAGCTGCTCTATAGCACTTTGGAAGAAGCCAGCAAAAAA TATCCCGCCTATCAAAATATTTATATCGAGGCCATGGTTGCTCGTTTGCCTAAATGGGGTGGTTCTCCGGAAGAAGTCGA AAAAATCGCCAGAATGGCCGCAGAAAAAAACAAAGATCAATCGGGACTTTCTTACTACGCTTATATCTGGAGTAATGCAA TCCATTACCAACCTGAATTAATGGCTTTACTGAATAAACGTCAGATTGTCTCCTGGGACGATATGCTGCAAGGTTGGAGA GATCGCTACAAACAGTTCCCATCAACCCGCACGCTTAATAATATTCTGATAAGCTCCTGCATTGCCCGCGATAAAGACTC CTTTGTGAAAGCAGATAAAATGATTCAAGGGGAAACGGAGCGGGATACCTGGCCACAAGGGTTAAATTATCGGGAATGCC AGCAGTCCTTCCAATAA
Upstream 100 bases:
>100_bases GGACAGAAATTCAATGTTATTGAAAAATATTGTCATAGGTGCATTAATGGCTATTCCTGCGCTGGCGTCAGCTAATAGCC TCACGGAAACACGGGAAAGA
Downstream 100 bases:
>100_bases TTGCCAGATTACCATCACAGTTTAATGCACAGCATTAATTGAATTAAGCCGCCTCTGCCGTTATATGCAGAGGTGGTTTA ATGGGAAATGTCCTTCAACC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAIEQQAIAYTVSQKWDKLDAMFQEYNTGFPTTSGGTHKLVIAWGGIYNLFSVDVSDNGISGVAKEWLKANPKSTGARLL QAMVFDAKAVNLRGEGAASTVDSDIWPKYKKLMIQEKEYLLKNKDIADKDVTWYQEMEMVARNLEDKELLYSTLEEASKK YPAYQNIYIEAMVARLPKWGGSPEEVEKIARMAAEKNKDQSGLSYYAYIWSNAIHYQPELMALLNKRQIVSWDDMLQGWR DRYKQFPSTRTLNNILISSCIARDKDSFVKADKMIQGETERDTWPQGLNYRECQQSFQ
Sequences:
>Translated_298_residues MAIEQQAIAYTVSQKWDKLDAMFQEYNTGFPTTSGGTHKLVIAWGGIYNLFSVDVSDNGISGVAKEWLKANPKSTGARLL QAMVFDAKAVNLRGEGAASTVDSDIWPKYKKLMIQEKEYLLKNKDIADKDVTWYQEMEMVARNLEDKELLYSTLEEASKK YPAYQNIYIEAMVARLPKWGGSPEEVEKIARMAAEKNKDQSGLSYYAYIWSNAIHYQPELMALLNKRQIVSWDDMLQGWR DRYKQFPSTRTLNNILISSCIARDKDSFVKADKMIQGETERDTWPQGLNYRECQQSFQ >Mature_297_residues AIEQQAIAYTVSQKWDKLDAMFQEYNTGFPTTSGGTHKLVIAWGGIYNLFSVDVSDNGISGVAKEWLKANPKSTGARLLQ AMVFDAKAVNLRGEGAASTVDSDIWPKYKKLMIQEKEYLLKNKDIADKDVTWYQEMEMVARNLEDKELLYSTLEEASKKY PAYQNIYIEAMVARLPKWGGSPEEVEKIARMAAEKNKDQSGLSYYAYIWSNAIHYQPELMALLNKRQIVSWDDMLQGWRD RYKQFPSTRTLNNILISSCIARDKDSFVKADKMIQGETERDTWPQGLNYRECQQSFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34243; Mature: 34112
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEQQAIAYTVSQKWDKLDAMFQEYNTGFPTTSGGTHKLVIAWGGIYNLFSVDVSDNGI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCH SGVAKEWLKANPKSTGARLLQAMVFDAKAVNLRGEGAASTVDSDIWPKYKKLMIQEKEYL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKNKDIADKDVTWYQEMEMVARNLEDKELLYSTLEEASKKYPAYQNIYIEAMVARLPKWG HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GSPEEVEKIARMAAEKNKDQSGLSYYAYIWSNAIHYQPELMALLNKRQIVSWDDMLQGWR CCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH DRYKQFPSTRTLNNILISSCIARDKDSFVKADKMIQGETERDTWPQGLNYRECQQSFQ HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure AIEQQAIAYTVSQKWDKLDAMFQEYNTGFPTTSGGTHKLVIAWGGIYNLFSVDVSDNGI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCH SGVAKEWLKANPKSTGARLLQAMVFDAKAVNLRGEGAASTVDSDIWPKYKKLMIQEKEYL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKNKDIADKDVTWYQEMEMVARNLEDKELLYSTLEEASKKYPAYQNIYIEAMVARLPKWG HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GSPEEVEKIARMAAEKNKDQSGLSYYAYIWSNAIHYQPELMALLNKRQIVSWDDMLQGWR CCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH DRYKQFPSTRTLNNILISSCIARDKDSFVKADKMIQGETERDTWPQGLNYRECQQSFQ HHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA