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The map label for this gene is ruvB [H]

Identifier: 16765236

GI number: 16765236

Start: 1989054

End: 1990064

Strand: Reverse

Name: ruvB [H]

Synonym: STM1894

Alternate gene names: 16765236

Gene position: 1990064-1989054 (Counterclockwise)

Preceding gene: 16765237

Following gene: 161353595

Centisome position: 40.97

GC content: 57.17

Gene sequence:

>1011_bases
ATGATAGAAGCAGATCGCCTGATTTCAGCAGGCGCCACGATCGCAGAAGACGTCGCCGATCGCGCCATTCGCCCGAAGTT
ATTGGCGGAATATGTCGGCCAACCGCAGGTGCGCTCCCAGATGGAGATCTTTATTCAGGCGGCAAAACGGCGTGGCGACG
CACTAGATCACTTGCTGATTTTCGGCCCGCCAGGGTTAGGTAAAACGACTCTGGCGAATATCGTTGCCAATGAAATGGGC
GTCAATCTCCGAACCACGTCCGGCCCGGTGCTGGAAAAAGCAGGCGATCTGGCGGCTATGCTCACCAATCTTGAACCGCA
TGATGTGCTGTTTATTGATGAGATTCACCGGCTTTCACCGGTGGTGGAAGAGGTACTCTATCCGGCGATGGAAGATTACC
AGTTGGATATTATGATTGGCGAAGGGCCTGCCGCACGTTCAATTAAGATCGATCTGCCGCCGTTTACGCTCATTGGCGCG
ACGACGCGCGCCGGGTCGTTAACGTCCCCGCTACGTGACCGTTTTGGTATTGTGCAGCGCCTGGAGTTCTACCAGGTGCC
CGATCTGCAGCACATCGTTGGGCGCAGCGCAAGGCACATGGGGCTTGAGATGAGCGATGACGGCGCGCTGGAAGTGGCGC
GTCGGGCGCGCGGTACGCCGCGTATAGCCAACCGTCTGCTCAGACGTGTGCGTGATTTTGCTGAGGTGAAGCATGACGGG
GCTATTTCAGCGGAAATTGCCGCGCAGGCGCTGGATATGCTGAACGTCGATGCGGAAGGGTTTGACTATATGGATCGCAA
GCTGCTGCTGGCGGTTATTGATAAATTCTTCGGTGGTCCGGTGGGACTGGATAACCTGGCGGCGGCGATTGGCGAAGAGC
GTGAAACCATTGAGGATGTGCTGGAGCCGTATCTGATTCAGCAAGGCTTTTTGCAGCGTACGCCGCGTGGGCGTATGGCA
ACGGTGCGCGCCTGGAACCATTTCGGGATCACGCCGCCAGAGATGCCTTAG

Upstream 100 bases:

>100_bases
CGCAAGAAGCCAGTCGGATGGTAAGCAAGATCGCCCGTCCGGATGCAAGCAGTGAAACACTGATTCGCGACGCGTTACGC
GCCGCGTTATGAGGTAAAGG

Downstream 100 bases:

>100_bases
CGCCTGAAGTCGCTGCGCTCATCAGACCTGGGCGATTTTGTAGGCCCGGTAAGCGCAGCGCCACCGGGCAACACACGCTT
AGCTTGCCTGCTTTTTCATC

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMG
VNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMA
TVRAWNHFGITPPEMP

Sequences:

>Translated_336_residues
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMG
VNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMA
TVRAWNHFGITPPEMP
>Mature_336_residues
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMG
VNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMA
TVRAWNHFGITPPEMP

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=336, Percent_Identity=96.4285714285714, Blast_Score=650, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 37019; Mature: 37019

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLI
CCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHH
LEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
HHHHCCCCHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLI
CCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHH
LEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
HHHHCCCCHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHH
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA