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The map label for this gene is mig-3 [H]

Identifier: 16765208

GI number: 16765208

Start: 1963476

End: 1964357

Strand: Reverse

Name: mig-3 [H]

Synonym: STM1868

Alternate gene names: 16765208

Gene position: 1964357-1963476 (Counterclockwise)

Preceding gene: 39546330

Following gene: 16765198

Centisome position: 40.44

GC content: 50.68

Gene sequence:

>882_bases
ATGTATATCGGTCCACACGGACACGTCGTTATTGTGGACGCAGACGGTAATGCGGAAACCTTTGGTCTTATGGACGGCGG
TGTGGATGCTGCTATTACGGCATATTTCGGGTCGCAATTACAGGAACGGGTACAGCAAAATATCATCCGTGAATACCTGG
GGGAACAGCCCGTCGGCACCGCCTTTGTTATTGAAACGGGTAACAGTAAACATCCGTGGCTGGTTCCCGCCCCGACGATG
CGCGTTCCGCTGATTATTGACGGCACCGACGCGGTTTATAATGCAACACGGGCTGCGTTACTGGCAATTTTTCAGCACAA
TAAAAGCGCCGGAGAAGACCGGAAAATTACATCTGTTGCATTACCTGCAATGGGGGCCGGATGTGGTCAGGTCCCCCCCG
GACAGCGTCGCCCGGCAAATTGTACTGATATAGCCCCTCCTGATATTCCCTCCAGTCATATTGCTGTTTTTGACGCTGAA
ACCCAAACGTGGAGTCTGCAGGAGGATCACCGCGGCGAGACGGTTTACGACACAACAACCGGCAATCAGGTTTATATCTC
CGATCTTGGTCCGCTACCTGAAAACGTCACATCAGTTTCACCAGGTGGTGGATACAAAAAATGGGATAGTAAGGCTCAGG
TCTGGATGAATGATGAAGCTGCGGAGGCCGCAGCCAGACTTCGTGAAGCTGAAGGAACGAAAAACAGACTCCTGCAAATA
GCGTCTGAAAAAATCGCGCCGTTACAGGATGCAGTGGATCTGGACGAAGCAACCAATAAAGAAAAAGCTTCTCTTCTGGC
ATGGAGAAAGTACCGGGTACAGGTAAACCGTGTTGATACTTTAAAGCCTGTCTGGCCGGAGAAACCAGCCAGTAGTTTAT
AA

Upstream 100 bases:

>100_bases
AGATTCCAATCACACTTCATTTCAGCTAGGAGGTGGTGCGTGGACACAGGCCGCTGGCGACCATGCGCATACAGTTTATA
TCGGAGGACACGAGCACACC

Downstream 100 bases:

>100_bases
TTTGTCAGGAAAGCTCAGGCCTTATTTATAGCAAATATGAAGAAGGCCTGTCTGTCATAACTGATATGGTTACTGGCTAG
TATATTAAATTTATACTCAA

Product: phage-tail assembly-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTM
RVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAE
TQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQI
ASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL

Sequences:

>Translated_293_residues
MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTM
RVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAE
TQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQI
ASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
>Mature_293_residues
MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTM
RVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAE
TQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQI
ASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787637, Length=157, Percent_Identity=57.3248407643312, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI2367120, Length=157, Percent_Identity=56.687898089172, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787402, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 31769; Mature: 31769

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS51154 MACRO

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGT
CEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVA
EEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
LPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCEEEEECC
GNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQI
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHH
ASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
HHHHCCCHHHHHCCHHHCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGT
CEECCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVA
EEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
LPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCEEEEECC
GNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQI
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHH
ASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
HHHHCCCHHHHHCCHHHCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 1602967; 7920643 [H]