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The map label for this gene is appC [H]

Identifier: 16765133

GI number: 16765133

Start: 1890393

End: 1891937

Strand: Direct

Name: appC [H]

Synonym: STM1792

Alternate gene names: 16765133

Gene position: 1890393-1891937 (Clockwise)

Preceding gene: 16765132

Following gene: 16765134

Centisome position: 38.92

GC content: 55.53

Gene sequence:

>1545_bases
ATGTGGGATGTCATTGACTTATCGCGCTGGCAGTTTGCGCTGACCGCGCTGTATCACTTTTTATTTGTTCCTCTTACGCT
TGGGCTGATTTTTTTGCTGGCCGTCATGGAGACGATCTATGTGGTGACGGGGAAAACCGTCTACCGCGATATGACGCGTT
TCTGGGGCAAGCTCTTCGGGATCAATTTTGCTCTCGGTGTGGCTACCGGCCTGACCATGGAGTTTCAGTTCGGGACTAAC
TGGTCGCTCTATTCCAACTATGTGGGCGATATCTTCGGCGCGCCGCTGGCGATGGAAGCGTTACTGGCCTTTTTTCTCGA
ATCCACTTTTGTCGGTCTGTTCTTTTTCGGCTGGCAGCGGCTGAATAAATACCAACACCTGCTGGTCACCTGGCTGGTGG
CCTTCGGCTCCAATATTTCAGCATTATGGATTCTGAATGCCAATGGCTGGATGCAGTATCCTACCGGCGCTCATTTCAAC
ATCGATACGTTACGGATGGAAATGAGCAGCTTCAGCGATCTGGTCTTTAACCCGGTGAGCCAGGTGAAATTCGTCCATAC
CGTCATGTCCGGTTATGTCACCGGCGCCATGTTTATTATGTCCATCAGCGCCTGGTATCTGCTACGTGGCCGCGAGCGTG
AGGTGGCCTTGCGCTCGTTTGCTATCGGCTCAGTATTCGGCACCCTGGCCATTCTGGGAACCCTGCAACTGGGGGACAGT
TCGGCCTACGAAGTCGCCCAAATTCAGCCGGTGAAACTGGCGGCGATGGAAGGCGAATGGCAAACCGAACCCGCGCCCGC
GCCGTTTCATCTGATTGCCTGGCCGCAGCAGGAACAGGAGCGTAATGCATTTGCCGTGAAGATCCCTGCTCTGCTGGGTA
TTCTGGCCACCCATTCGCTGGATACACCGGTTCCGGGGTTAAAAAACCTGATGGACGACGCTCTGCCGCGCCTGAAGCGT
GGCCGGGAGGCCTGGTTACTCATGAAGGAGATAGCGCAAGGCAATCGCTCGCCGCAGGTACTGAATGCGTTTCACGCCGT
TGAGGGCGATCTGGGGTACGGCATTCTGCTGGCGAAATATGCCCCGGATATGAACCATGTGACGCCGGAGCAGTATCGTG
CGGCCCAGCGTGGCGCTATTCCTCAGGTGGCGCCGGTGTTCTGGAGTTTCCGTATTATGGTCGGCTGCGGTTCGCTGCTG
TTAGTGGTGATGTTGATTGCGTTGATACAGACGCTGCGAATGCGTATCGACCAGCATCGCTGGGTATTGCGTATGACGCT
GTGGAGCCTGCCGTTACCGTGGATTGCCATTGAAGCCGGTTGGTTTATGACGGAGTTTGGCCGTCAGCCCTGGGCGATTC
AGGACATTCTGCCGACCTGGTACGCTCACTCCGCGCTGACGCCGGGCCAGCTGGCCTTCTCAATGGGACTTATCCTCGGA
CTTTACACCCTGTTTTTAATCGCGGAAGTCTATCTGATGCAGAAGTACGCGCGTCTTGGGCCGAGCGCCATGCAACATCA
ACAACAAGCGCAACAACAGGGATAA

Upstream 100 bases:

>100_bases
TCTGCCGATGGCTGGAGACGCGCTAGCGCTCTCAACAGGAACGTCACCGGAGTCCGGTACTGATTAGCTTTTTACTCTCT
TTCTGCCTACAGGAGTTAGC

Downstream 100 bases:

>100_bases
AGGAGACAATCATGTTGGATTATGAAACGTTGCGGTTCATTTGGTGGCTGCTGATCGGCGTCATCCTGGTGGCATTTATG
GTAACTGACGGGTTTGATAT

Product: cytochrome oxidase subunit I

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit I [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFGINFALGVATGLTMEFQFGTN
WSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFN
IDTLRMEMSSFSDLVFNPVSQVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS
SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKR
GREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLL
LVVMLIALIQTLRMRIDQHRWVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG
LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG

Sequences:

>Translated_514_residues
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFGINFALGVATGLTMEFQFGTN
WSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFN
IDTLRMEMSSFSDLVFNPVSQVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS
SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKR
GREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLL
LVVMLIALIQTLRMRIDQHRWVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG
LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG
>Mature_514_residues
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFGINFALGVATGLTMEFQFGTN
WSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFN
IDTLRMEMSSFSDLVFNPVSQVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS
SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSLDTPVPGLKNLMDDALPRLKR
GREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKYAPDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLL
LVVMLIALIQTLRMRIDQHRWVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG
LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=514, Percent_Identity=88.9105058365759, Blast_Score=933, Evalue=0.0,
Organism=Escherichia coli, GI87081779, Length=505, Percent_Identity=61.7821782178218, Blast_Score=667, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 58031; Mature: 58031

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
INFALGVATGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQR
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFNIDTLRMEMSSFSDLVFNPVS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCHHH
QVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL
CCCCHHEECCEEEEEECCCCCCCCCCCCEEEEECCCCHHCCCCEEEEHHHHHHHHHHCCC
DTPVPGLKNLMDDALPRLKRGREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEC
APDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLLLVVMLIALIQTLRMRIDQHR
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG
HHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
INFALGVATGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQR
HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFNIDTLRMEMSSFSDLVFNPVS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCHHH
QVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL
CCCCHHEECCEEEEEECCCCCCCCCCCCEEEEECCCCHHCCCCEEEEHHHHHHHHHHCCC
DTPVPGLKNLMDDALPRLKRGREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEC
APDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLLLVVMLIALIQTLRMRIDQHR
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG
HHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]