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The map label for this gene is ybeQ [H]

Identifier: 16765101

GI number: 16765101

Start: 1853726

End: 1855255

Strand: Reverse

Name: ybeQ [H]

Synonym: STM1760

Alternate gene names: 16765101

Gene position: 1855255-1853726 (Counterclockwise)

Preceding gene: 16765102

Following gene: 16765098

Centisome position: 38.19

GC content: 49.48

Gene sequence:

>1530_bases
ATGCGTTTTTCATCAATTTTCAAAATAATAATATTAAATATATTTATTTCAAAAATGGCTCACGCTGCTGTCTGCGAGGA
GCGCTATCCCGCCGACTCAGAAGAATGCCAGTACGTTCAGGAATTAGAGCAAAAAGCGGAACAAGGAGATGAAAGCGCGC
AGTTCTCGCTTGGAAGCTGGTATGCGGAGGGGCGATACGTTAAGCCTGATTATAAACTAGCCATAAAATGGCTGGAGAAA
GCGGGTAAACAAGGTTCTGATTTTTCCTATTTCATCCTTGGCTATCATTACAACTATGGTGAAAATTTTCCACTTAGTCG
ACAAAAAGCGCTGGAGTGGTATCGCAAGGCGGCAGAGCTAGGGGATAGTAGTACGCAAGAAATCCTCGGTGACGCCTATA
TGTATGGCGATGGGTTTCCCCAAAATACCCAGCTAGCGCTGGAGTGGTATCGAAAAGCCGCCTCTCCAACCAATGATGCG
GGCGTTGTCCGCGGACAGGGTTCAGCTTCGTCAGCACAATTTAAGCTTGGAGTAATGTACGCCCACGGTCAGGGCGTTCC
TCAGGATTATCAGCAAACGGCGATCTTGATGCGTAAAGCGGCGGAAAATATGTACTACCCCGCGCAACTTTATCTCGGCG
TTGCCTATTTTTATGGTGAAGGCGTGCCTCAGGATTATCGTCAGGCAGTTTACTGGCTTAATGAAGGTATACCAGGCAGC
TATACGCCAGGCCACATTCCGCTGAATGCGCTCTATGATAAAGCGCATCCCGCTGACCGGGTTCACTCTCAGACGTGGTA
TCGAAAAACAGCGCAACGCGTGATGGCAAAGGTACAGTACAATTTTGGCGTATGGTATTACAACGGTTATCACTTATTGA
AAGATCACAACCTGGCGCTGGAGTGGTATCGCAGAGCCGCAGCGCAAGGATTGGCCGAGGCGCAGGATGCGATCGGCGTG
ATGTTTATGCAGGGTGAGGGCGTTTCTCAGGACTACCAACAGGCGCTGGCGTGGTATCGCAAAGCCGCTCGCCAGGGGCT
GCCTGCTGCGCAAACGCATCTGGGCATCATGTCTGCATTTGGTCGCGGCGTCGCGCAAAGCGACAGACAGGCTATCGCAT
GGTATCGAAAAGCAGCAAAACAGGATTTTGCGAAAGCGCAATATCAGCTTGGCGTAGCATATAGCACGGGAAGAGGCGTG
CCTGAAAATAGCCGGAATGCGCTGAAGTGGTACCTCAAAGCGGCAGAGCAGGGGTTTACTCCGGCACAATCAGCGCTTGG
GGAAATTTATGCTCATGGGCGCCAGGGTGTGCCTAAAGATAATAAGCAGGCCTATATTTGGTATTACATGGCAAGTATGT
ATACGGAAAAATCTAAGGATGATTGTTCAGCGCTCATTGCCGAAAGAAACCGACTCAAGGGAACGCTCACCCCAGATCAA
CTTAGCGAGACATATGCCGCCTTTAATCTCATCTGGCGAAAAATTGATCAGTCAAAGGAGGCGAAAAAGATTGCCAGGAA
GAAGTATTGA

Upstream 100 bases:

>100_bases
TTGTTTTTGGGTTTATTCAGCATCTGTGCGAGTTTTTTGTAAGCAGAAAAATGATGATGCAGCATATAATCACGCCATAA
ACGACAATAAGGATAGTTGT

Downstream 100 bases:

>100_bases
TAAGATAACCAATAAGCCATGGCGCCATGGAGTGAAGTCTGCCTGTGGGGGCGATGAAGATTGATTGAGGCGCTGCCGGG
AGATTATGGTGGTGGGGGAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGV
PENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFNLIWRKIDQSKEAKKIARKKY

Sequences:

>Translated_509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGV
PENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFNLIWRKIDQSKEAKKIARKKY
>Mature_509_residues
MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEK
AGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDA
GVVRGQGSASSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
YTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGV
MFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGV
PENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQ
LSETYAAFNLIWRKIDQSKEAKKIARKKY

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=350, Percent_Identity=26.5714285714286, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI151301150, Length=356, Percent_Identity=25.2808988764045, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI217330658, Length=177, Percent_Identity=28.8135593220339, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI217330656, Length=177, Percent_Identity=28.8135593220339, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081769, Length=287, Percent_Identity=31.7073170731707, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786867, Length=166, Percent_Identity=35.5421686746988, Blast_Score=82, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=355, Percent_Identity=26.7605633802817, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355295, Length=273, Percent_Identity=28.9377289377289, Blast_Score=93, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 57837; Mature: 57837

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEECQYVQELEQKAEQGDESAQFSLGSW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
YAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAEL
ECCCCEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMY
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEE
AHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
YTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLAL
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCHHH
EWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAF
HHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
PAQSALGEIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LSETYAAFNLIWRKIDQSKEAKKIARKKY
HHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEECQYVQELEQKAEQGDESAQFSLGSW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
YAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAEL
ECCCCEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMY
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEE
AHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGS
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
YTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLAL
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCHHH
EWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAF
HHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
PAQSALGEIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LSETYAAFNLIWRKIDQSKEAKKIARKKY
HHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]