| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16765075
Identifier: 16765075
GI number: 16765075
Start: 1826933
End: 1827811
Strand: Direct
Name: 16765075
Synonym: STM1731
Alternate gene names: NA
Gene position: 1826933-1827811 (Clockwise)
Preceding gene: 16765074
Following gene: 16765077
Centisome position: 37.61
GC content: 53.36
Gene sequence:
>879_bases ATGTTTCGACACGTAAAACAACTTCAATATACTGTGCGAGTGAGCGAACCTAATCCTGGATTAGCGAACCTGCTGCTGGA ACAGTTTGGCGGCCCGCAGGGCGAACTGGCGGCCGCCTGCCGCTACTTCACGCAAGGTTTAAGCGATGATGATGCCGGTC GTAGAGAAATGTTAATGGACATCGCCACCGAGGAGCTGAGTCATCTGGAAATTATCGGCTCACTGGTAGGAATGCTTAAT AAAGGCGCTAAAGGCGAGCTGGCGGAAGGTACCGAAAACGAAGCGGAACTTTATCGCTCGCTGACGCAGAATGGTAATGA TAGCCATATCACCTCTCTGCTGTATGGCGGCGGCCCGGCGTTGACAAACTCCGGCGGCGTACCGTGGACCGCGGCTTATA TTGATACTATCGGCGAAGTCACAGCCGATCTACGCTCAAACATCGCGGCAGAGGCGCGAGCGAAGATCATTTATGAACGC CTGATTAATCTGACCGACGATCCTGGCGTAAAAGACACACTCAGTTTCTTAATGACCCGTGAAGTCGCGCACCAGCTCTC TTTTGAAAAGGCGCTGTATTCGATTCGTAACAACTTCCCGCCGGGTAAATTACCGCCGGTAGAACAGTATACCGACGTGT ACTACAACATGTCGCAAGGCGACGATCCGCGAGGTAGCTGGAATAGCGATGAGAACTTCAACTATGTCGCAGAACCGATG CCTGCTGTTGATGGCGGCGATGGCCTGGCGACAGTGAAATTGCCGCGCGAGCAGATGGCGCTGCTCAAAGCGATGGCAGA AAGAACGAAATCGGACCCCACCGTTGATCCTCTCACTGGCGCAGAACTAGGCTGCGGCGAACCGAAAGAAGACAAGTGA
Upstream 100 bases:
>100_bases TGGCTTATCAAACATATTCCGCAGACAACGGAACAATTTTTACTGCGATCTGAAGCAGATGGCGTTGAAGCCAAAAAATA AATAATAAGCAGGAGGCAAT
Downstream 100 bases:
>100_bases GTTCCGACAAGTAAAATCCGTGTGTCATGTCCTTTTTTGACCCCGCCTGGCGGGGTCTTTTTTCGTCACAACATCACGCG ATTAGAAACGATAGCCTGCC
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK
Sequences:
>Translated_292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK >Mature_292_residues MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMDIATEELSHLEIIGSLVGMLN KGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPALTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYER LINLTDDPGVKDTLSFLMTREVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM PAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 31847; Mature: 31847
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMD CCHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH IATEELSHLEIIGSLVGMLNKGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC LTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYERLINLTDDPGVKDTLSFLMTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFRHVKQLQYTVRVSEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDAGRREMLMD CCHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH IATEELSHLEIIGSLVGMLNKGAKGELAEGTENEAELYRSLTQNGNDSHITSLLYGGGPA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC LTNSGGVPWTAAYIDTIGEVTADLRSNIAAEARAKIIYERLINLTDDPGVKDTLSFLMTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EVAHQLSFEKALYSIRNNFPPGKLPPVEQYTDVYYNMSQGDDPRGSWNSDENFNYVAEPM HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGLATVKLPREQMALLKAMAERTKSDPTVDPLTGAELGCGEPKEDK CCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]