| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yciW [H]
Identifier: 16765045
GI number: 16765045
Start: 1793124
End: 1794104
Strand: Direct
Name: yciW [H]
Synonym: STM1701
Alternate gene names: 16765045
Gene position: 1793124-1794104 (Clockwise)
Preceding gene: 16765044
Following gene: 16765046
Centisome position: 36.92
GC content: 55.86
Gene sequence:
>981_bases ATGGAACAATGCCGAAAAGCGGGTAAAAGCCACTGGTATCATGAAACACAATCCACTATGTCGTCACAAACCCCGCTTTC GCTAATGCCGGAAGCCGCGTATGTTAACGATCGTTTTTTACTGGATTTAACGGTAGCAGAAACCGCGTTGACGCCTTTTG AGTCATGGTTAAAGCCCGCTCGCCAGTTGGCGGATGTCTTATTTCCCCGCACGGTTCTCAACGACCGGCTTCATACGTTT AGCGCCTATGAACGTATGAGCACCGCGCTGACCGCCGCTCAGGTATTTGGGGTTCAGCGTTTGTGTCGCTATTATGCCGC GCGTCTGGCGCCGCTACCTGGCCCTGACGCCTCAAGAGAGAGCAATCAACGGCTGGCGCAAATTACGCAATACGCTCGTC AGCTTGCCGGCTCCCCCTCCGTTATCAATACGCGGGCCCGCGAACAGCTTGCAGAGGTGGGATTAACCGCCCGGGATACC GTACTCATCAATCAGATCATTGGGTTTATCGGTTTTCAGGCGCGGGTAGCGGCGATATTTCAGGCGTTTTGCCGTCTGCC CGTGCGCGAACTGCCCGGCCAGGAGATGCAGCGCTTTGCCAGGGCCGCGCGGTTTCAAAACCCCCAGACGATATGGCGGC CCGCCGCCAGTCTGGTAGAATATCCTCCAGCCCATACCAAAGTTCGGCGGCAATATTCGTCTTCACAATGCCAAATGATG GCGCCGGTACTCATGCGCGATCCGTCTTCATTCGCGTTACTCGAACGCATACTGACCAGCACATTACACACTGCATCGCC CCCTTCTTTACTTCCACTTATCACGCTCCTCACATCACGTATCAACGGCAGCGCCGCCTGCTTTAACGAACAGGCAACCC AACCTGGCGCGTGGCGTCGCGCTGTCATCACGTTACGCCAGGAAGACGACGACATCGCTCGTTGGGAACTTGAGCCTGCG CTGACACAGGCGATACAATGA
Upstream 100 bases:
>100_bases AACAATCTTTCATCCCTTTCCCGCATACGCCAGGATAATCCAGCATAAACGATCCGACGCCGAATCATTATCGATCGCCA TTTCATCCTCGGGAAACCCT
Downstream 100 bases:
>100_bases CTCACCAGAGCGCCCGATCGCTTTAGCGCCGCGCATTTTTTCCCGCTACTCACCAGGGGAGTTTCATCGGAGCAGGCCAT TAATATGTTAGGCTGGTGCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLTVAETALTPFESWLKPARQLADVLFPRTVLNDRLHTF SAYERMSTALTAAQVFGVQRLCRYYAARLAPLPGPDASRESNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDT VLINQIIGFIGFQARVAAIFQAFCRLPVRELPGQEMQRFARAARFQNPQTIWRPAASLVEYPPAHTKVRRQYSSSQCQMM APVLMRDPSSFALLERILTSTLHTASPPSLLPLITLLTSRINGSAACFNEQATQPGAWRRAVITLRQEDDDIARWELEPA LTQAIQ
Sequences:
>Translated_326_residues MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLTVAETALTPFESWLKPARQLADVLFPRTVLNDRLHTF SAYERMSTALTAAQVFGVQRLCRYYAARLAPLPGPDASRESNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDT VLINQIIGFIGFQARVAAIFQAFCRLPVRELPGQEMQRFARAARFQNPQTIWRPAASLVEYPPAHTKVRRQYSSSQCQMM APVLMRDPSSFALLERILTSTLHTASPPSLLPLITLLTSRINGSAACFNEQATQPGAWRRAVITLRQEDDDIARWELEPA LTQAIQ >Mature_326_residues MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLTVAETALTPFESWLKPARQLADVLFPRTVLNDRLHTF SAYERMSTALTAAQVFGVQRLCRYYAARLAPLPGPDASRESNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDT VLINQIIGFIGFQARVAAIFQAFCRLPVRELPGQEMQRFARAARFQNPQTIWRPAASLVEYPPAHTKVRRQYSSSQCQMM APVLMRDPSSFALLERILTSTLHTASPPSLLPLITLLTSRINGSAACFNEQATQPGAWRRAVITLRQEDDDIARWELEPA LTQAIQ
Specific function: Unknown
COG id: COG4950
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081868, Length=330, Percent_Identity=50.9090909090909, Blast_Score=312, Evalue=2e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36630; Mature: 36630
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLTVAETALTPFESWLKPA CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHH RQLADVLFPRTVLNDRLHTFSAYERMSTALTAAQVFGVQRLCRYYAARLAPLPGPDASRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDTVLINQIIGFIGFQARVAAIF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QAFCRLPVRELPGQEMQRFARAARFQNPQTIWRPAASLVEYPPAHTKVRRQYSSSQCQMM HHHHCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH APVLMRDPSSFALLERILTSTLHTASPPSLLPLITLLTSRINGSAACFNEQATQPGAWRR HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH AVITLRQEDDDIARWELEPALTQAIQ HHHEEECCCCCHHHHCCCHHHHHHCC >Mature Secondary Structure MEQCRKAGKSHWYHETQSTMSSQTPLSLMPEAAYVNDRFLLDLTVAETALTPFESWLKPA CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHH RQLADVLFPRTVLNDRLHTFSAYERMSTALTAAQVFGVQRLCRYYAARLAPLPGPDASRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SNQRLAQITQYARQLAGSPSVINTRAREQLAEVGLTARDTVLINQIIGFIGFQARVAAIF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QAFCRLPVRELPGQEMQRFARAARFQNPQTIWRPAASLVEYPPAHTKVRRQYSSSQCQMM HHHHCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH APVLMRDPSSFALLERILTSTLHTASPPSLLPLITLLTSRINGSAACFNEQATQPGAWRR HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHH AVITLRQEDDDIARWELEPALTQAIQ HHHEEECCCCCHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]