Click here to switch to the map view.

The map label for this gene is ycjF [H]

Identifier: 16765027

GI number: 16765027

Start: 1777869

End: 1778930

Strand: Reverse

Name: ycjF [H]

Synonym: STM1684

Alternate gene names: 16765027

Gene position: 1778930-1777869 (Counterclockwise)

Preceding gene: 308065965

Following gene: 16765026

Centisome position: 36.62

GC content: 56.69

Gene sequence:

>1062_bases
ATGAGCGAACCGTTAAAACCGCGTATTGATTTTGCAGAACCGCTAAAGGAGGAACCTACGTCGGCCTTCAAAGCGCAGCA
AACTTTCAGCGAAGCGGAGTCGCGTACATTTGCGCCTGCAGCTATCGATGAGCGCCCGGAAGACGAAGGCGCGGCAGAAG
CGGCGGTCGATGCCGCGCTGCGCCCCAAACGCAGCCTGTGGCGTAAAATGGTGATGGGAGGACTGGCGCTGTTTGGCGCG
AGCGTGGTCGGGCAAGGCGTACAGTGGACAATGAATGCCTGGCAAACTCAGGACTGGGTCGCTTTAGGCGGCTGTGCCGC
AGGCGCGCTGATCGTTGGCGCTGGCGTGGGATCGGTGGTCACGGAGTGGCGGCGATTATGGCGCTTGCGCCAGCGGGCGC
ATGAACGCGATGAAGCGCGTGAACTGTTACATAGCCATAGCGTCGGGAAAGGTCGCGCATTTTGCGAAAAACTGGCGCAG
CAGGCGGGGATTGATCAATCACATCCGGCATTACAACGTTGGTATGCCGCTATTCACGAAACGCAAAACGACAGGGAAAT
CGTCGGTTTGTATGCGAATCTGGTACAGCCGGTACTTGACGCGCAGGCGCGACGTGAGATTAGCCGTTTCGCCGCGGAAT
CGACTCTGATGATCGCCGTCAGCCCGTTAGCGTTGGTGGATATGGCGTTTATTGCCTGGCGTAATTTACGCCTGATTAAC
CGCATCGCAACGCTGTATGGCATTGAACTTGGTTATTACAGCCGCCTTCGTCTGTTCCGTCTGGTGTTGCTGAATATCGC
GTTTGCGGGAGCCAGTGAGCTGGTGCGTGAAGTCGGTATGGACTGGATGTCTCAGGATCTGGCCGCACGCTTGTCCACGC
GTGCGGCGCAGGGGATTGGCGCAGGTCTCCTTACCGCTCGACTGGGAATAAAAGCGATGGAGCTATGTCGACCATTGCCG
TGGATCGATAACGATAAACCACGTCTCGGTGATTTTCGTCGTCAGCTTATCGGTCAGCTAAAAGAGACGCTGCAAAAGAG
TAAGTCGTCGCCTGAGAAATGA

Upstream 100 bases:

>100_bases
AGTTCGAAGCCTTTCGTCCGCAGGTGATGGATGTTGATAAACCGTTACCGCATATTCGTCTGGACGCTGCGCTGGAGTTT
TTAATAGGAGATAAGCTGCG

Downstream 100 bases:

>100_bases
CCTTTCACATGGCGCTGACGGCCTGGCTTTACGCCGCAGCGCCCGTTTTTCCGCCATGCTGTCAATATTTGTTGACAGAA
TCCTTCCTGCCAGCCGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESRTFAPAAIDERPEDEGAAEAAVDAALRPKRSLWRKMVMGGLALFGA
SVVGQGVQWTMNAWQTQDWVALGGCAAGALIVGAGVGSVVTEWRRLWRLRQRAHERDEARELLHSHSVGKGRAFCEKLAQ
QAGIDQSHPALQRWYAAIHETQNDREIVGLYANLVQPVLDAQARREISRFAAESTLMIAVSPLALVDMAFIAWRNLRLIN
RIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLP
WIDNDKPRLGDFRRQLIGQLKETLQKSKSSPEK

Sequences:

>Translated_353_residues
MSEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESRTFAPAAIDERPEDEGAAEAAVDAALRPKRSLWRKMVMGGLALFGA
SVVGQGVQWTMNAWQTQDWVALGGCAAGALIVGAGVGSVVTEWRRLWRLRQRAHERDEARELLHSHSVGKGRAFCEKLAQ
QAGIDQSHPALQRWYAAIHETQNDREIVGLYANLVQPVLDAQARREISRFAAESTLMIAVSPLALVDMAFIAWRNLRLIN
RIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLP
WIDNDKPRLGDFRRQLIGQLKETLQKSKSSPEK
>Mature_352_residues
SEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESRTFAPAAIDERPEDEGAAEAAVDAALRPKRSLWRKMVMGGLALFGAS
VVGQGVQWTMNAWQTQDWVALGGCAAGALIVGAGVGSVVTEWRRLWRLRQRAHERDEARELLHSHSVGKGRAFCEKLAQQ
AGIDQSHPALQRWYAAIHETQNDREIVGLYANLVQPVLDAQARREISRFAAESTLMIAVSPLALVDMAFIAWRNLRLINR
IATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPW
IDNDKPRLGDFRRQLIGQLKETLQKSKSSPEK

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=353, Percent_Identity=88.1019830028329, Blast_Score=614, Evalue=1e-177,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 39227; Mature: 39095

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESRTFAPAAIDERPEDEGAAEAAVDAAL
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHH
RPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIVGAGVGSVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHH
TEWRRLWRLRQRAHERDEARELLHSHSVGKGRAFCEKLAQQAGIDQSHPALQRWYAAIHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TQNDREIVGLYANLVQPVLDAQARREISRFAAESTLMIAVSPLALVDMAFIAWRNLRLIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHH
RIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
AGLLTARLGIKAMELCRPLPWIDNDKPRLGDFRRQLIGQLKETLQKSKSSPEK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEPLKPRIDFAEPLKEEPTSAFKAQQTFSEAESRTFAPAAIDERPEDEGAAEAAVDAAL
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHH
RPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIVGAGVGSVV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHH
TEWRRLWRLRQRAHERDEARELLHSHSVGKGRAFCEKLAQQAGIDQSHPALQRWYAAIHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TQNDREIVGLYANLVQPVLDAQARREISRFAAESTLMIAVSPLALVDMAFIAWRNLRLIN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHH
RIATLYGIELGYYSRLRLFRLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
AGLLTARLGIKAMELCRPLPWIDNDKPRLGDFRRQLIGQLKETLQKSKSSPEK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA