BacMap

Definition	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession	NC_003197
Length	4,857,432

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The map label for this gene is yjgI [H]

Identifier: 16765018

GI number: 16765018

Start: 1768000

End: 1768713

Strand: Direct

Name: yjgI [H]

Synonym: STM1675

Alternate gene names: 16765018

Gene position: 1768000-1768713 (Clockwise)

Preceding gene: 16765014

Following gene: 16765021

Centisome position: 36.4

GC content: 57.42

Gene sequence:

>714_bases
ATGACGCTATTTCGCAACAAATCTGTACTGGTTTTAGGGGGAAGTCGTGGTATCGGCGCGGCTATTGTACGACGCTTTAG
CGCTGACGGCGCATCGGTCGTTTTCAGCTACGCCGGATCGCGTGAAGCCGCCGAAAAACTGGCAACGGAAACCGGAAGCA
TCGCCATCCAGACGGATAGCGCCGATCGTGATGCCGTCATCAGCCTCGTGCGTGAGTACGGACCGCTGGATATTCTGGTC
GTCAATGCGGGCGTCGCTCTCTTCGGCGATGCGCTGGAACAAGATAGCGATGCGATAGATCGTTTGTTCCGTATTAATAT
CCATGCGCCTTACCATGCGTCAGTCGAAGCAGCCCGCAACATGCCGGAAGGTGGACGCATTATTATTATCGGTTCCGTGA
ATGGCGATCGGATGCCCGTACCGGGAATGGCCGCGTACGCCGCCAGTAAATCAGCCCTGCAAGGGCTGGCGCGCGGCCTG
GCCCGTGATTTTGGCCCCCGCGGGATTACGATAAATGTGGTGCAGCCAGGCCCGATTGATACCGACATCAATCCGGAAGA
TGGCCCCATGAAAGAGCTGATGCACAGTTTCATGGCGATCAAACGACACGGAAGACCTGAAGAAGTGGCTGGAATGGTGG
CATGGCTTGCCGGTCCGGAAGCCTCTTTCGTCACCGGCGCGATGCACACCATCGATGGTGCCTTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GTTCGGCTATGTTTTGTAGTCATTACTACATAACTCCTTGACGGCATGATTTCATTACGCATATTGTAGTGGCTACTACA
ATATCATAAAGGACATCCTG

Downstream 100 bases:

>100_bases
CGGCCAGGCGAATATCACACGGTTGCCGTCTACGCTCCGGCAACCGTGTTAGAAGCTGTTCATGCGAGAAAACATCCGCA
AGCGCCGGGATCAATCGTGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLATETGSIAIQTDSADRDAVISLVREYGPLDILV
VNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEAARNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGL
ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Sequences:

>Translated_237_residues
MTLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLATETGSIAIQTDSADRDAVISLVREYGPLDILV
VNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEAARNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGL
ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>Mature_236_residues
TLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLATETGSIAIQTDSADRDAVISLVREYGPLDILVV
NAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEAARNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGLA
RDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=33.4710743801653, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI5031737, Length=237, Percent_Identity=32.0675105485232, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=31.0204081632653, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=30.3643724696356, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI33667109, Length=213, Percent_Identity=31.4553990610329, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=30.4878048780488, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=28.4518828451883, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=27.8884462151394, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI223718074, Length=235, Percent_Identity=29.7872340425532, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI20149619, Length=228, Percent_Identity=28.5087719298246, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI66933014, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=28.0632411067194, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4503817, Length=221, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=80.168776371308, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=31.9672131147541, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=36.4016736401674, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=34.251968503937, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=32.2314049586777, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=28.8702928870293, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=27.8884462151394, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=29.3877551020408, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=31.0204081632653, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790717, Length=241, Percent_Identity=26.5560165975104, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789208, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.3253012048193, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=34.375, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=33.0612244897959, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=28.735632183908, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=252, Percent_Identity=28.968253968254, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=28.0769230769231, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=251, Percent_Identity=27.8884462151394, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=29.9595141700405, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=192, Percent_Identity=27.6041666666667, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=26.5625, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=28.0442804428044, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=29.6747967479675, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=29.3172690763052, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=27.6119402985075, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=27.3076923076923, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=197, Percent_Identity=29.4416243654822, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=25.5639097744361, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=26.3358778625954, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=248, Percent_Identity=27.0161290322581, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=26.9961977186312, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=25.6704980842912, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=22.7450980392157, Blast_Score=63, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=31.8918918918919, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=31.8548387096774, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=30.4, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=30.1158301158301, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=30.5785123966942, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=30.9917355371901, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=29.5833333333333, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=27.9835390946502, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24644337, Length=171, Percent_Identity=31.5789473684211, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24663911, Length=241, Percent_Identity=29.4605809128631, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007236, Length=209, Percent_Identity=29.1866028708134, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24888; Mature: 24756

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLATETGSIAIQTDS
CCEECCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECC
ADRDAVISLVREYGPLDILVVNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEAARN
CCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHC
MPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLATETGSIAIQTDS
CEECCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECC
ADRDAVISLVREYGPLDILVVNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEAARN
CCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHC
MPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]