BacMap

Definition	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession	NC_003197
Length	4,857,432

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The map label for this gene is dbpA [H]

Identifier: 16764999

GI number: 16764999

Start: 1748288

End: 1749661

Strand: Reverse

Name: dbpA [H]

Synonym: STM1655

Alternate gene names: 16764999

Gene position: 1749661-1748288 (Counterclockwise)

Preceding gene: 16765000

Following gene: 16764997

Centisome position: 36.02

GC content: 55.31

Gene sequence:

>1374_bases
GTGACCACTTTTTCAACCCTGAATGTTTTGCCCGCCGCCCAGCTCAATAACCTTACTGAGCTGGGCTATCTTGAGATGAC
GCCTGTTCAGGCCGCAGCATTACCCGTCATTCTGGCGGGTAATGATGTGCGTGTGCAGGCCAGGACCGGTAGCGGCAAAA
CGGCGGCGTTTGGTCTTGGGCTCTTGCATCGAATTGACGTCACTCTGTTCCAGACACAGGCATTAGTGCTGTGCCCGACG
CGGGAGCTGGCGGATCAGGTTGCCGGAGAGTTACGTCGCCTGGCCCGTTTTCTGCCAAATACCAAAATTCTGACCTTGTG
TGGCGGGCAACCCTTTGGCGCACAGCGCGACTCGCTTCAGCACGCTCCGCATATCATTGTCGCGACGCCGGGGCGCCTGC
TGGATCATTTACAAAAAGAAACCGTATCGCTGGATGCGCTGCATATTCTGGTAATGGATGAAGCAGACCGAATGCTGGAC
ATGGGATTCAGTGACGCCATTGATGAGGTGATCCGCTTTGCGCCTGCGACGCGCCAGACGTTATTGTTTTCAGCAACCTG
GCCTGAGGCCATCGCGGCGATTAGCGGTCGTGTACAGCAGCAGCCAATACGTATTGAAATCGATACGGTAGATGCGCTAC
CGGCTATCGAACAACAGTTCTTCGAAACGTCTGCGCATGAAAAAATTTCGCTGCTACAAACGTTGCTTAGCCAGCATCAG
CCAGCGTCCTGCGTGGTATTTTGCAATACCAAAAAAGATTGTCAGGCCGTTTGTGATGCGCTTAATGCGGTAGGACAAAG
CGCGTTGGCGCTCCACGGCGATCTGGAACAACGCGACCGCGACCAGACGTTGGTGCGTTTTGCAAATGGCAGCGCGCGCA
TTCTGGTTGCCACCGACGTTGCCGCGCGAGGGTTAGACATTAAATCGCTCGAACTGGTGGTTAACTATGAACTGGCCTGG
GACCCGGAGGTGCATGTCCATCGTATTGGCCGTACGGCGCGCGCGGGAAGCAGCGGCCTGGCGATCAGTTTCTGCGCGCC
GGAAGAGGCGCAGCGGGCGAATATTCTTTCAGAAATGCTGCAACTCAAGCTGAACTGGCTGAATGCGCCCGCCCGGCAGC
CGTTACTCCCTCTGGCCGCAGAGATGGCTACCCTATGCATTGACGGCGGCAAAAAAGCGAAAATGCGTCCGGGAGATATT
TTGGGCGCGCTGACCGGCGATATTGGATTAGACGGGGCGGATATTGGCAAAATTAACGTGCATCCAATGCACGTTTACGT
CGCCGTACGTCAAGCAGTAGCGCAAAAAGCCTGGAAGCAGTTGCAAAACGGGAAGATCAAAGGCAAGTCATGCCGGGTAC
GGCTATTAAAATGA

Upstream 100 bases:

>100_bases
CCGCCGCCGGACGAAGAACCGATTAAAATGTCGCATCAAACGCCCGGATCTGCGAGGATACGCGCCTGCTGACTATGAGT
CGTTACCGCGAGAGTAAATT

Downstream 100 bases:

>100_bases
TCGATAGCATGGCGTCTCAGCGGAGTGCTGAGACGCCTGCAGATTATTTCACTTCGATAACATCAAGCCGCAACGCCTCT
AAGGCGGTGTCATCTTCTTC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLD
MGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAW
DPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDI
LGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK

Sequences:

>Translated_457_residues
MTTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLD
MGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAW
DPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDI
LGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
>Mature_456_residues
TTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLLHRIDVTLFQTQALVLCPTR
ELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDM
GFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQP
ASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAARGLDIKSLELVVNYELAWD
PEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDIL
GALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=377, Percent_Identity=36.8700265251989, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.0974212034384, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI224593278, Length=383, Percent_Identity=37.0757180156658, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI21071032, Length=389, Percent_Identity=35.73264781491, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI45446747, Length=428, Percent_Identity=34.3457943925234, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI45446743, Length=428, Percent_Identity=34.3457943925234, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI164664518, Length=343, Percent_Identity=31.7784256559767, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI20149629, Length=347, Percent_Identity=35.7348703170029, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=36.0335195530726, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI262118318, Length=382, Percent_Identity=35.6020942408377, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=33.9425587467363, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI262231852, Length=382, Percent_Identity=35.6020942408377, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI216548263, Length=382, Percent_Identity=35.6020942408377, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI13518015, Length=382, Percent_Identity=35.6020942408377, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=35.792349726776, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=36.3888888888889, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.0967741935484, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI148613856, Length=366, Percent_Identity=34.1530054644809, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI38201710, Length=366, Percent_Identity=34.1530054644809, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=34.7480106100796, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=37.2654155495979, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=37.2654155495979, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI38327634, Length=364, Percent_Identity=36.8131868131868, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI83700235, Length=352, Percent_Identity=34.375, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=32.8912466843501, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=30.7262569832402, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=30.7262569832402, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.375, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=31.5186246418338, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=31.830985915493, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI51094101, Length=340, Percent_Identity=36.4705882352941, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI164419743, Length=340, Percent_Identity=36.4705882352941, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI188035877, Length=343, Percent_Identity=35.8600583090379, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI41327779, Length=365, Percent_Identity=34.2465753424658, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI13514831, Length=379, Percent_Identity=34.5646437994723, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI256223453, Length=385, Percent_Identity=28.3116883116883, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI41327776, Length=346, Percent_Identity=32.6589595375723, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=29.3628808864266, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI8922886, Length=372, Percent_Identity=30.3763440860215, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI6005743, Length=372, Percent_Identity=30.1075268817204, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI9506931, Length=387, Percent_Identity=29.9741602067183, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=30.6818181818182, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=31.0769230769231, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI38569503, Length=357, Percent_Identity=28.5714285714286, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI38569505, Length=357, Percent_Identity=28.5714285714286, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=27.810650887574, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI9966805, Length=316, Percent_Identity=33.5443037974684, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI256773275, Length=358, Percent_Identity=31.0055865921788, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI154759257, Length=436, Percent_Identity=27.7522935779816, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI17505907, Length=201, Percent_Identity=34.8258706467662, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI20336298, Length=201, Percent_Identity=34.8258706467662, Blast_Score=103, Evalue=5e-22,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=87.527352297593, Blast_Score=822, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=41.8918918918919, Blast_Score=271, Evalue=9e-74,
Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=38.3419689119171, Blast_Score=243, Evalue=3e-65,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=38.375350140056, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=36.7164179104478, Blast_Score=180, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI71995724, Length=339, Percent_Identity=34.8082595870207, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17507121, Length=355, Percent_Identity=34.3661971830986, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=340, Percent_Identity=35, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=331, Percent_Identity=40.1812688821752, Blast_Score=218, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=366, Percent_Identity=35.5191256830601, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=349, Percent_Identity=37.5358166189112, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=34.8404255319149, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=37.8531073446328, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=37.8531073446328, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=37.8531073446328, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=402, Percent_Identity=35.0746268656716, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=388, Percent_Identity=34.7938144329897, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=36.3128491620112, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=29.4285714285714, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=35.1123595505618, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=36.5853658536585, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=358, Percent_Identity=30.1675977653631, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=354, Percent_Identity=34.4632768361582, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI115532548, Length=358, Percent_Identity=34.0782122905028, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=36.7952522255193, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=36.7952522255193, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=351, Percent_Identity=33.9031339031339, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=367, Percent_Identity=35.149863760218, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=31.7135549872123, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=31.7135549872123, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=365, Percent_Identity=33.4246575342466, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=363, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=31.7135549872123, Blast_Score=181, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=361, Percent_Identity=31.3019390581717, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=30.6748466257669, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.6532951289398, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=30.4945054945055, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=399, Percent_Identity=31.5789473684211, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=411, Percent_Identity=30.9002433090024, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=29.6019900497512, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17508543, Length=370, Percent_Identity=28.3783783783784, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=26.4197530864197, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=30.2631578947368, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=188, Percent_Identity=31.3829787234043, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=391, Percent_Identity=27.3657289002558, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=339, Percent_Identity=25.9587020648968, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.190332326284, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=82, Percent_Identity=43.9024390243902, Blast_Score=89, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=36.7403314917127, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6321856, Length=368, Percent_Identity=38.8586956521739, Blast_Score=225, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=356, Percent_Identity=39.0449438202247, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=38.1081081081081, Blast_Score=216, Evalue=6e-57,
Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=31.9783197831978, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=33.1306990881459, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=36.0655737704918, Blast_Score=202, Evalue=8e-53,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=35.3474320241692, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=35.3474320241692, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6320119, Length=340, Percent_Identity=32.0588235294118, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=35.4838709677419, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=347, Percent_Identity=34.8703170028818, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=361, Percent_Identity=35.4570637119114, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=32.7868852459016, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6321111, Length=349, Percent_Identity=32.6647564469914, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=408, Percent_Identity=29.1666666666667, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=31.7258883248731, Blast_Score=179, Evalue=9e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=356, Percent_Identity=33.7078651685393, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=29.7297297297297, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=411, Percent_Identity=29.9270072992701, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=28.7634408602151, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=31.8051575931232, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=25.6038647342995, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=25.4237288135593, Blast_Score=106, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6321374, Length=427, Percent_Identity=23.4192037470726, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322876, Length=160, Percent_Identity=35, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24584399, Length=343, Percent_Identity=38.1924198250729, Blast_Score=232, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24645031, Length=349, Percent_Identity=34.6704871060172, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=37.6731301939058, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=36.2880886426593, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=37.1273712737127, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24585582, Length=329, Percent_Identity=37.3860182370821, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24642151, Length=350, Percent_Identity=36, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI18857967, Length=419, Percent_Identity=34.3675417661098, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=34.9030470914127, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=34.6260387811634, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=34.9462365591398, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=34.9726775956284, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=34.9726775956284, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI17977678, Length=349, Percent_Identity=35.243553008596, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24662330, Length=347, Percent_Identity=37.1757925072046, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=32.7127659574468, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=32.2388059701493, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=32.2388059701493, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=37.7005347593583, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=35.1800554016621, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=35.1800554016621, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24582080, Length=349, Percent_Identity=32.378223495702, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24582078, Length=349, Percent_Identity=32.378223495702, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI17136248, Length=349, Percent_Identity=32.378223495702, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24582075, Length=349, Percent_Identity=32.378223495702, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=31.1428571428571, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=37.1794871794872, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI21355559, Length=389, Percent_Identity=33.6760925449871, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI17647335, Length=372, Percent_Identity=29.3010752688172, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=28.9887640449438, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=28.9887640449438, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=29.4117647058824, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.8681318681319, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24643725, Length=375, Percent_Identity=27.4666666666667, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.9093655589124, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=29.2613636363636, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI20130173, Length=341, Percent_Identity=28.4457478005865, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=24.5714285714286, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17136666, Length=223, Percent_Identity=28.2511210762332, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49595; Mature: 49464

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
CCCCCCCCCCCCHHHCCCHHCCEEEECCCHHHHEEEEEECCEEEEEEECCCCCCHHHHHH
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HHHHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQT
CCCEEEEECCHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCE
LLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
EEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCEEEEEEECH
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
HHCCCCEEEEEEEEEEEEECCCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure 
TTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
CCCCCCCCCCCHHHCCCHHCCEEEECCCHHHHEEEEEECCEEEEEEECCCCCCHHHHHH
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HHHHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQT
CCCEEEEECCHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCCE
LLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
EEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCEEEEECCCEEEEEEECH
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
HHCCCCEEEEEEEEEEEEECCCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH
QLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]