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The map label for this gene is hupZ [H]

Identifier: 16764882

GI number: 16764882

Start: 1611302

End: 1612045

Strand: Reverse

Name: hupZ [H]

Synonym: STM1537

Alternate gene names: 16764882

Gene position: 1612045-1611302 (Counterclockwise)

Preceding gene: 16764883

Following gene: 16764881

Centisome position: 33.19

GC content: 51.08

Gene sequence:

>744_bases
ATGTTATTGATAATCATGGAGGGGAGCTGGTCAGGGTTCAGGTACGATGACGACGATTCGGAGGTCTCAATGCATCTCAA
AGAAATAACCAGCCAGGGGTACTATATCTATGAAGCGCCGGTCCGTTTATGGCACTGGATCACGGCGTTATCCATTGTCG
TCCTGGCTGTTACAGGATATTTCATTGGCCGCCCCCTGCCATCGATTCAAGGTGAAGCGACCTTTATGTTTTGGATGGGC
TGGATACGACTGATCCATTTTACCACGGCGTATATTTTTACTGTCGCGCTGCTGTTTCGTATTTACTGGGCATGTGTCGG
CAATGAGTACGCCAGGGAGATGTTTCTGGTTCCGTTCTGGCGCCGCGCCTGGCGCAAAGGCGTTATCAGCGAAATCCGCT
GGTATTTTTTCCTCGAAAAAGAGGCCCATCGTTACTATGGACATAATCCGGTAGCGGGACTGGCGGTAATGTTCTATTTC
TGGATGTCCGTACTGATGGTGTGTAGCGGCTTTGCGCTCTATGGCGAAGGACTTGGAACAGACAGTTGGGCGTATCAATG
GTTTGGCTGGATGATTCGCCTGACTGGCAACGATAGCCTCGCGCTGCATTTCTGGCACCGGCTGGGCATGTGGTTCATTA
TCGCCTTCGTCATTGCGCATGTTTATACCGCTATCCGCGAAGACATTATGAGCCGACAAAGCGTGATTTCCGTCATGATA
AGCGGCTGGCGCTGGTTCAGGTGA

Upstream 100 bases:

>100_bases
GAAGCGGCGTTAATGGGGACTAAACTCGCCGTTCCCGATCAACCATTGGAGATTTTACGTACTCTGCACAGCTTCGATCC
CTGCCTGGCCTGCTCCACCC

Downstream 100 bases:

>100_bases
TAACAATGGCAGAAGTAACAATCTTAGGGCTTGGCAACCTGCTTTGGGCAGATGAAGGGTTCGGCGTCAGAGCGGCGGAA
AAGCTGTTTGAACAGTATGC

Product: Ni/Fe hydrogenase 1 b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITALSIVVLAVTGYFIGRPLPSIQGEATFMFWMG
WIRLIHFTTAYIFTVALLFRIYWACVGNEYAREMFLVPFWRRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYF
WMSVLMVCSGFALYGEGLGTDSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYTAIREDIMSRQSVISVMI
SGWRWFR

Sequences:

>Translated_247_residues
MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITALSIVVLAVTGYFIGRPLPSIQGEATFMFWMG
WIRLIHFTTAYIFTVALLFRIYWACVGNEYAREMFLVPFWRRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYF
WMSVLMVCSGFALYGEGLGTDSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYTAIREDIMSRQSVISVMI
SGWRWFR
>Mature_247_residues
MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITALSIVVLAVTGYFIGRPLPSIQGEATFMFWMG
WIRLIHFTTAYIFTVALLFRIYWACVGNEYAREMFLVPFWRRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYF
WMSVLMVCSGFALYGEGLGTDSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYTAIREDIMSRQSVISVMI
SGWRWFR

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=226, Percent_Identity=54.4247787610619, Blast_Score=247, Evalue=5e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 29378; Mature: 29378

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00882 NI_HGENASE_CYTB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITALSIVVLAVTGY
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
FIGRPLPSIQGEATFMFWMGWIRLIHFTTAYIFTVALLFRIYWACVGNEYAREMFLVPFW
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYFWMSVLMVCSGFALYGEGLGT
HHHHHHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
DSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYTAIREDIMSRQSVISVMI
CHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGWRWFR
HHHHCCC
>Mature Secondary Structure
MLLIIMEGSWSGFRYDDDDSEVSMHLKEITSQGYYIYEAPVRLWHWITALSIVVLAVTGY
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
FIGRPLPSIQGEATFMFWMGWIRLIHFTTAYIFTVALLFRIYWACVGNEYAREMFLVPFW
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RRAWRKGVISEIRWYFFLEKEAHRYYGHNPVAGLAVMFYFWMSVLMVCSGFALYGEGLGT
HHHHHHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
DSWAYQWFGWMIRLTGNDSLALHFWHRLGMWFIIAFVIAHVYTAIREDIMSRQSVISVMI
CHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGWRWFR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7966281 [H]