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The map label for this gene is hoxQ [H]

Identifier: 16764878

GI number: 16764878

Start: 1608903

End: 1609964

Strand: Reverse

Name: hoxQ [H]

Synonym: STM1533

Alternate gene names: 16764878

Gene position: 1609964-1608903 (Counterclockwise)

Preceding gene: 16764879

Following gene: 16764877

Centisome position: 33.14

GC content: 50.38

Gene sequence:

>1062_bases
GTGAATCATTCCAGAACTATTCCAGTCGTTAATATTGCCGGACCAGGATCGCAGCCAGAAGAGGAAGACTTTAACTTTCT
TCCCATCCCCGCCGGCATTAATCTCCCGCTGACGCCGGTTTTACCGGAACAGGCGCTGCCCGCTGAGCTCCGTGTTGCCA
GACACATCCTGACTACGCTTATTCGCGATATGGATAACCCGGTGGCAACGCTCCCCTTTCCCCTGAGCTATAAGCTGAAT
GCCACTGAGCAACAGAATAGCGGTTTATTGGATCAACTGCTCGGCGAAGGTGAAATCTCCGCCCGGGTACTATTATCCGA
TGGAAAAGAACAGCGTATTCAGGAGACGGTTTTTACGGGCGTCTGGCGTGTGCGTGAATATAACGCTGACCAGCAACGGG
TTGCCGATGAAATTATCATTGGCCCGATCCCAGAGAGCATCTGGCAGACGCATCCGCAGCCGCCGATTACGCCAGAATTG
CCGCCACAACCGGCGGGATTGATGAATGGCGCCTTTATCGCGCATGAAATAGCCGAGCGCGTAAAACAGCCGGTAAAAGA
GCCACATATCATTAACTTAACGCTGTTGCCAGTAAACGATGCCGATCGCGAGTATCTGGATCATTTTTTAGGCGAAGGCT
GTAGCGCTATTTTTTCACGCGGATATGGTAAATGCCGGATTGTAAGCACGCATTTTCCCGGCGTATGGCGGGTCAACTAT
TTCAATGATATGAATACATTACTGCAAGATATGATTGAGATAGCGGACATTCCTGATATCGCCGTTGCAGGCATCGACGA
TATTGAAGATGCCTACGCGGGGCTAAAAAATACGTTGGAATGGTTGAAAGAATACCCGGTCACAGAAAATGAGCCAGTGG
TGCGCATGGAGTGCAAAGTATGTTGGTGGGTTTACGACCCTGCGCTGGGCGATGATGTATGGCAAATTCCACCCGGCGTG
CCCTTCAACCAGTTACCTGATTACTGGTGCTGTCCGGTTTGCGAAACCAGTAAGTCCGGGTTTATGGTGATCGATGAAGG
TAATAGTTCGTGCAAAGATTGA

Upstream 100 bases:

>100_bases
GCTGGCAAGAATACTCTCAGCGGGTGGCCGCATTGCTGACCACACCGGGCTATCGTCAGGATATTCCCGTTATCACGCAA
TAGAATGAAAGGTAACACAC

Downstream 100 bases:

>100_bases
CCGTCTATTCTCACCCGCTACGGATTATCTGGCAGGAGGCGCCGATCGGTCGTTTGTTACAGGGCGCAACGCCGGTATAC
GCAAAAACGCTTATTTCACG

Product: hydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFNQLPDYWCCPVCETSKSGFMVIDEGNSSCKD

Sequences:

>Translated_353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFNQLPDYWCCPVCETSKSGFMVIDEGNSSCKD
>Mature_353_residues
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTLIRDMDNPVATLPFPLSYKLN
ATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTGVWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPEL
PPQPAGLMNGAFIAHEIAERVKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKVCWWVYDPALGDDVWQIPPGV
PFNQLPDYWCCPVCETSKSGFMVIDEGNSSCKD

Specific function: Not Known. Could Enhance The Incorporation Of Nickel To The Hydrogenase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupH/hyaF family [H]

Homologues:

Organism=Escherichia coli, GI1787211, Length=276, Percent_Identity=31.8840579710145, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006894 [H]

Pfam domain/function: PF04809 HupH_C [H]

EC number: NA

Molecular weight: Translated: 39501; Mature: 39501

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTL
CCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRDMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTG
HHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPELPPQPAGLMNGAFIAHEIAER
HHHHHHCCCHHHHHHHHHEECCCCHHHHCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHH
VKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
HHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEE
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKV
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
CWWVYDPALGDDVWQIPPGVPFNQLPDYWCCPVCETSKSGFMVIDEGNSSCKD
EEEEECCCCCCCCEECCCCCCHHHCCCCEECCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNHSRTIPVVNIAGPGSQPEEEDFNFLPIPAGINLPLTPVLPEQALPAELRVARHILTTL
CCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IRDMDNPVATLPFPLSYKLNATEQQNSGLLDQLLGEGEISARVLLSDGKEQRIQETVFTG
HHHCCCCCEECCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VWRVREYNADQQRVADEIIIGPIPESIWQTHPQPPITPELPPQPAGLMNGAFIAHEIAER
HHHHHHCCCHHHHHHHHHEECCCCHHHHCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHH
VKQPVKEPHIINLTLLPVNDADREYLDHFLGEGCSAIFSRGYGKCRIVSTHFPGVWRVNY
HHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCEEEEEE
FNDMNTLLQDMIEIADIPDIAVAGIDDIEDAYAGLKNTLEWLKEYPVTENEPVVRMECKV
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
CWWVYDPALGDDVWQIPPGVPFNQLPDYWCCPVCETSKSGFMVIDEGNSSCKD
EEEEECCCCCCCCEECCCCCCHHHCCCCEECCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]