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The map label for this gene is ydeD [H]

Identifier: 16764862

GI number: 16764862

Start: 1595829

End: 1596731

Strand: Direct

Name: ydeD [H]

Synonym: STM1517

Alternate gene names: 16764862

Gene position: 1595829-1596731 (Clockwise)

Preceding gene: 16764860

Following gene: 16764866

Centisome position: 32.85

GC content: 53.6

Gene sequence:

>903_bases
ATGATGTCGCGTAAAGACGGTTTTTTGGCGTTACTGGTGGTTGTCGTATGGGGGCTCAATTTTGTTGTCATCAAAGTAGG
CCTGCACCATATGCCGCCATTATTGCTGGCAGGATTACGATTTTTACTGGTGGCGTTTCCGGCAATTTTCTTTGTCGCCC
GGCCTAAAGTCCCGCTTACGCTGTTGCTGGGCTATGGGCTGACGATAAGCTTTGGGCAGTTCGCCTTTCTCTTTTGCGCG
ATAAAGTTTGGTATGCCCGCAGGACTGGCGTCGTTGGTATTACAGGCGCAGGCCTTTTTTACCATGGCATTGGGGGCGTT
TGTTTTTAGCGAGCGGTTACAACGTAAGCAGTTGGCGGGGATCGCCCTGGCGATTATAGGTGTACTGGTATTGATTGAAG
CCAGTCTCAACGGACAGCATATAGCGATGTCGGGATTTATGCTGACTCTGGCGGCGGCATTTAGCTGGGCCTGCGGCAAT
ATCTTTAATAAAAAAATTATGCAACATAGTCCGCGCCCGGCGGTGATGTCGCTGGTGGTCTGGAGCGCGCTGATCCCGAT
CCTGCCGTTCCTGCTGTCATCGCTGCTACTGGAGGGGGCGGATCACATTACGCAAAGCCTTATTACCATCGATATGACGA
CGATATTGTCGCTGCTTTATCTGGCTTTTGTCGCCACTATACTTGGCTACGGCATCTGGGGCGCGTTACTGGGGCGCTAT
GAGACCTGGCGCGTGGCGCCGTTATCATTGCTGGTGCCGGTAGTCGGGCTGGCGAGCGCCGCGGTGTTACTCGGGGAAAC
GTTGACCGGGATGCAGCTTGCGGGCGCAGTACTGATTATGGCTGGACTCTATATCAATGTGTTTGGATTTCGTGTGCGCC
GTACTGCGCGTGTCAGCGGATGA

Upstream 100 bases:

>100_bases
TGTTCAATGCCATGCTCACGGTAAAAAGAAAAGTCCTGTTATGGCGCACTGATTTCCGATAACTTACCTTTTTACAAAAT
TTTAATAATGACAGGGGCCG

Downstream 100 bases:

>100_bases
GGCATTATGTTACTAAGAAGACAAACGCTAATTTCAGACCATGCCGCGGGGTAATAGCGGCGGACTTGTCATAGCCAGAC
GGTACTAAAAAAATGCCCCG

Product: O-acetylserine/cysteine export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLVAFPAIFFVARPKVPLTLLLGYGLTISFGQFAFLFCA
IKFGMPAGLASLVLQAQAFFTMALGAFVFSERLQRKQLAGIALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGN
IFNKKIMQHSPRPAVMSLVVWSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSLLYLAFVATILGYGIWGALLGRY
ETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGAVLIMAGLYINVFGFRVRRTARVSG

Sequences:

>Translated_300_residues
MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLVAFPAIFFVARPKVPLTLLLGYGLTISFGQFAFLFCA
IKFGMPAGLASLVLQAQAFFTMALGAFVFSERLQRKQLAGIALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGN
IFNKKIMQHSPRPAVMSLVVWSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSLLYLAFVATILGYGIWGALLGRY
ETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGAVLIMAGLYINVFGFRVRRTARVSG
>Mature_300_residues
MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLVAFPAIFFVARPKVPLTLLLGYGLTISFGQFAFLFCA
IKFGMPAGLASLVLQAQAFFTMALGAFVFSERLQRKQLAGIALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGN
IFNKKIMQHSPRPAVMSLVVWSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSLLYLAFVATILGYGIWGALLGRY
ETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGAVLIMAGLYINVFGFRVRRTARVSG

Specific function: May be an export pump for several amino acids and their metabolites, including cysteine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=297, Percent_Identity=83.5016835016835, Blast_Score=476, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32292; Mature: 32292

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLVAFPAIFFVARPKVPLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLLGYGLTISFGQFAFLFCAIKFGMPAGLASLVLQAQAFFTMALGAFVFSERLQRKQLAG
HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGNIFNKKIMQHSPRPAVMSLVV
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSLLYLAFVATILGYGIWGALLGRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGAVLIMAGLYINVFGFRVRRTARVSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMSRKDGFLALLVVVVWGLNFVVIKVGLHHMPPLLLAGLRFLLVAFPAIFFVARPKVPLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLLGYGLTISFGQFAFLFCAIKFGMPAGLASLVLQAQAFFTMALGAFVFSERLQRKQLAG
HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALAIIGVLVLIEASLNGQHIAMSGFMLTLAAAFSWACGNIFNKKIMQHSPRPAVMSLVV
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WSALIPILPFLLSSLLLEGADHITQSLITIDMTTILSLLYLAFVATILGYGIWGALLGRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETWRVAPLSLLVPVVGLASAAVLLGETLTGMQLAGAVLIMAGLYINVFGFRVRRTARVSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9068629 [H]