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The map label for this gene is ydgH [H]

Identifier: 16764823

GI number: 16764823

Start: 1554224

End: 1555168

Strand: Reverse

Name: ydgH [H]

Synonym: STM1478

Alternate gene names: 16764823

Gene position: 1555168-1554224 (Counterclockwise)

Preceding gene: 16764826

Following gene: 16764822

Centisome position: 32.02

GC content: 53.44

Gene sequence:

>945_bases
ATGAAGCTTAAGAACACTCTCCTGGCGTCGGCTCTGCTTTCTGCGGCTGCTTTTTCTGTCCATGCAGCAACAGAACTGAC
GCCGGAGCAAGCGGCTGCACTAAAACCTTATGACCGCATCGTTATTACCGGTCGTTTTAATGCTATTGGCGATGCGGTCT
CCGCCGTGTCCCGCCGCGCAGATAAAGAAGGCGCAGCCTCCTTCTATGTTGTCGACACCTCGGAGTTCGGCAACAGTGGT
AACTGGCGTGTTGTGGCGGACGTGTATAAAGCCGACGCGCCGAAAGCCGACGCGCCCAAAAATCGTGTCATTAATGGCAT
CGTGGAATTACCGAAAGACCAGGCCGTACAATTAGAACCGTATGACACCGTCACCGTTCAGGGCTTCTACCGTAGCCAGC
CGGAAGTTAACGATGCCATTACGAAAGCGGCGAAACAAAAAGGCGCATACGCTTTCTATATTGTTCGTCAGATAGATGCG
AATCAGGGCGGAAACCAGCGCATCACTGCATTTATCTATAAACAAGATGCGAAAAAACGCATCGTCCAGAGCCCGGACGC
TATTCCGGCAGACTCTGAAGCTGGCCGCGCCGCGCTGGCTCAGGGCGGCGAAGCTGCGAAGAAAGTCGAAATTCCAGGCG
TCGCCACGTCAGCCTCGCCGAGCGCCGAAGTAGGCCGTTTCTTCGAAACGCAATCCTCCAAAGGCGGACGTTACACTGTC
ACACTTCCGGATGGCACAAAAGTTGAGGAGCTGAATAAAGCGACGGCTGCGATGATGGTGCCTTTCGACAGCGTTAAGTT
CACCGGCAACTACGGCAATATGACAGAAATCTCCTATCAGGTCGCCAAACGCGCGGCGAAGAAAGGCGCTAAGTATTATC
ATATTACGCGTCAGTGGCAGGAGCGCGGTAATAACATCACCATCAGCGCCGACCTCTATAAATAA

Upstream 100 bases:

>100_bases
ATCCCGCAGACATCCATATGGTTTAAATGCAATAATCAGCCACGTTTCTAGTCAATAACAATACCAGTACCTGGTTTGCG
CAAGGCGAAGGATTATTTTT

Downstream 100 bases:

>100_bases
GGCGCGCGTCGCCATCAGGCTTTCTCGCCGGATGGCGCATACCTGCCTTATCAGGCCTACACGATCGTTCAACGGCAGGC
CTGATAAGCCGCCATCCGGC

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRADKEGAASFYVVDTSEFGNSG
NWRVVADVYKADAPKADAPKNRVINGIVELPKDQAVQLEPYDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDA
NQGGNQRITAFIYKQDAKKRIVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSASPSAEVGRFFETQSSKGGRYTV
TLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQERGNNITISADLYK

Sequences:

>Translated_314_residues
MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRADKEGAASFYVVDTSEFGNSG
NWRVVADVYKADAPKADAPKNRVINGIVELPKDQAVQLEPYDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDA
NQGGNQRITAFIYKQDAKKRIVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSASPSAEVGRFFETQSSKGGRYTV
TLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQERGNNITISADLYK
>Mature_314_residues
MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRADKEGAASFYVVDTSEFGNSG
NWRVVADVYKADAPKADAPKNRVINGIVELPKDQAVQLEPYDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDA
NQGGNQRITAFIYKQDAKKRIVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSASPSAEVGRFFETQSSKGGRYTV
TLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQERGNNITISADLYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjfY [H]

Homologues:

Organism=Escherichia coli, GI1787889, Length=314, Percent_Identity=90.1273885350319, Blast_Score=545, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009923
- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 33915; Mature: 33915

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHC
DKEGAASFYVVDTSEFGNSGNWRVVADVYKADAPKADAPKNRVINGIVELPKDQAVQLEP
CCCCCCEEEEEECHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
YDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDANQGGNQRITAFIYKQDAKKR
CCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCHHHH
IVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSASPSAEVGRFFETQSSKGGRYTV
HHCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
TLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQ
ECCCCCCHHHHHHHHEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH
ERGNNITISADLYK
HCCCEEEEEEECCC
>Mature Secondary Structure
MKLKNTLLASALLSAAAFSVHAATELTPEQAAALKPYDRIVITGRFNAIGDAVSAVSRRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHC
DKEGAASFYVVDTSEFGNSGNWRVVADVYKADAPKADAPKNRVINGIVELPKDQAVQLEP
CCCCCCEEEEEECHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
YDTVTVQGFYRSQPEVNDAITKAAKQKGAYAFYIVRQIDANQGGNQRITAFIYKQDAKKR
CCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCHHHH
IVQSPDAIPADSEAGRAALAQGGEAAKKVEIPGVATSASPSAEVGRFFETQSSKGGRYTV
HHCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
TLPDGTKVEELNKATAAMMVPFDSVKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQ
ECCCCCCHHHHHHHHEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHH
ERGNNITISADLYK
HCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]