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The map label for this gene is ydiM [H]

Identifier: 16764712

GI number: 16764712

Start: 1442952

End: 1444163

Strand: Reverse

Name: ydiM [H]

Synonym: STM1361

Alternate gene names: 16764712

Gene position: 1444163-1442952 (Counterclockwise)

Preceding gene: 16764713

Following gene: 16764711

Centisome position: 29.73

GC content: 46.86

Gene sequence:

>1212_bases
ATGAAAAATCGTTATTTCCCTACCGCTGTAGGGTTGTATTTTAATTACTTTGTACATGGCATGGGGGTTATCCTGATGAG
CCTGAACATGTCATCGCTTGAACAGCAATGGCATACCAGTGCCGCAGGCGTATCTATTGTGATCTCTTCGCTTGGTATTG
GCCGGCTAAGCGTTTTGTTAATCGCCGGTATGCTTTCCGATCGCTTTGGTCGCCGTCCTTTTATCATTCTGGGGACCACC
TGTTACCTGATTTTTTTCATTGGCATTCTTTATGCTCAGACGATTTTTGTCGCTTATGCCTGTGGCTTTTTAGCGGGTAT
GGCCAACAGTTTTTTAGATGCAGGTACCTATCCCAGTTTGATGGAAGCCTTCCCTCGCTCCCCCAGTACGGCAAATATTC
TGATCAAAGCATTTGTCTCTGGCGGGCAATTCTTGTTGCCCATTATTATCAGTTTATTAGTCTGGGCTAATATGTGGTTT
GGCTGGTCCTTCCTGCTTGCCGGGGCGATCATGCTTATTAATGCTCTGTTTTTATTACGCTGCCCTTTTCCACCCTATCC
TGGTCGGATATTGAAGCCCAAAATCTCGCAAGCGCCAGTCACAGGCGTACATCATTGCTCCCTCATCGATCTTATCAGCT
ACACCCTTTATGGCTATATCTCGATGGCAACCTTTTATCTTATCAGCCAGTGGCTGGCGCAGTATGGACAGTTCGTCGCA
GGAATGTCGTATACCCAATCCATCAAACTGTTAAGTATTTATACCTGCGGATCGCTACTCTGCGTTTTTATTACCGCCCC
GCTGGTCAGAAAAACAATTCGCTCTACCACATTATTGATGTTTTATACCTTTATCTCTTTTATTGCGCTTCTGACGGTCT
GCCTGCATCCTCAGACCTATATTGTTATGATCTTCGCATTCGTCATTGGATTCTCTTCCGCCGGTGGCGTAGTACAAATC
GGCCTGACGCTGATGGCGTCCCGTTTTCCACAGGAGAAAGGTAAAGCGACCGGTATTTATTACAGCGCCGGCAGTATCGC
GACGTTCACTATTCCGTTGATCACAGCGCGGATTTCAGAAATGAGCATTGCACATATTATGTGGTTTGATACCGGTATCG
CCGCAGTGGGATTTCTCCTCGCACTGTTCATCGGTTACCGAAGTCGGGCTGAATCACAACATCACGCTGAAGCAGCGTCA
ACCGCGCAATAA

Upstream 100 bases:

>100_bases
AAGCCACACAATCACGACATTGACTTGTCACCCTATCCAATATGCTTCCTGCCTGTGTATACCACTGTAACGTTCAGGCG
GCATCTCTGAGTCAGATAAT

Downstream 100 bases:

>100_bases
ATGTTAGCGTGCCAGTTGCAATATTATTGCCTTGCTATGCAAAATAAAACGTTAGCCATTATCACCGGGAAACAAAAAAT
GTAATTTTCGTGTTAATTAT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFGRRPFIILGTT
CYLIFFIGILYAQTIFVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWF
GWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVTGVHHCSLIDLISYTLYGYISMATFYLISQWLAQYGQFVA
GMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQTYIVMIFAFVIGFSSAGGVVQI
GLTLMASRFPQEKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAVGFLLALFIGYRSRAESQHHAEAAS
TAQ

Sequences:

>Translated_403_residues
MKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFGRRPFIILGTT
CYLIFFIGILYAQTIFVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWF
GWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVTGVHHCSLIDLISYTLYGYISMATFYLISQWLAQYGQFVA
GMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQTYIVMIFAFVIGFSSAGGVVQI
GLTLMASRFPQEKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAVGFLLALFIGYRSRAESQHHAEAAS
TAQ
>Mature_403_residues
MKNRYFPTAVGLYFNYFVHGMGVILMSLNMSSLEQQWHTSAAGVSIVISSLGIGRLSVLLIAGMLSDRFGRRPFIILGTT
CYLIFFIGILYAQTIFVAYACGFLAGMANSFLDAGTYPSLMEAFPRSPSTANILIKAFVSGGQFLLPIIISLLVWANMWF
GWSFLLAGAIMLINALFLLRCPFPPYPGRILKPKISQAPVTGVHHCSLIDLISYTLYGYISMATFYLISQWLAQYGQFVA
GMSYTQSIKLLSIYTCGSLLCVFITAPLVRKTIRSTTLLMFYTFISFIALLTVCLHPQTYIVMIFAFVIGFSSAGGVVQI
GLTLMASRFPQEKGKATGIYYSAGSIATFTIPLITARISEMSIAHIMWFDTGIAAVGFLLALFIGYRSRAESQHHAEAAS
TAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=402, Percent_Identity=78.3582089552239, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI226510946, Length=392, Percent_Identity=36.2244897959184, Blast_Score=262, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44259; Mature: 44259

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]