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The map label for this gene is ydiQ [H]

Identifier: 16764705

GI number: 16764705

Start: 1434509

End: 1435273

Strand: Reverse

Name: ydiQ [H]

Synonym: STM1354

Alternate gene names: 16764705

Gene position: 1435273-1434509 (Counterclockwise)

Preceding gene: 16764707

Following gene: 16764704

Centisome position: 29.55

GC content: 53.99

Gene sequence:

>765_bases
ATGAAAATAATAACCTGCTTTAAGTTGGTGCCTGAAGAACAGGACATTACCGTGACCCCGGAGCATTCGCTCAATTTTGA
TCGTGCCGAGGCCAAAATCAGCCAGTTTGATTTAAATGCAATTGAGGCCGCCGCGCAGTTAGCTGGCGGTGGCGACGAGA
TCGCCGCGCTCACCGTCGGCGGCTCTCTGTTACAAAATTCAAAAGTCCGCAAAGATGTGTTATCCCGCGGGCCAGATGCG
CTTTTCATGGTTCAGGATGCGCAAATGGAGCACGCCCTGCCCAAAGAAACCGCGCTGGCGCTAGCATCCGCGGCGGAGAA
AATCGGCTTTGACCTGTTGCTCTTTGGAGAGGGCTCCGGCGATATTTATGCCCAACAGGTGGGCCTGCTGACTGGCGAAC
TCCTGAAACTCCCCGTCATCAACGCAGTAAGCCATATTCAACGCGACGGCGACAAAATCATCGTTGAACGCACACTGGAA
GAAGACGTTGAAATTATCGAGCTCACGCTGCCCGCGGTGCTTTGCGTGACCTCAGATATTAACGTTCCACGCATCCCGTC
AATGAAAGCCATTCTCGGCGCCGGGAAAAAAGCCGTTACGTCGTGGCTGGCGAGCGATATCCACTGGACCCCAACCACGC
CAATGGCGGAACTGGTCGCCATCTCGGTACCGCCGCAGACAGAACGCAAGCATATCATTCTCGATAACGATTCGCCGGAA
GCCATTACCGCACTGGCCGACCATTTGAAAAAATCCCTGAACTAA

Upstream 100 bases:

>100_bases
AGGAAAACAGATTGACCCATCGTAAACCTCTTCAGACTGCCGCAGACTATTTTCAGTCAGATTTACGTTACTTATCCGCA
CGCGACTCACTGGAGATGCA

Downstream 100 bases:

>100_bases
GCCCAACGGAGAAAAATTATCATGAATCATTTAGCTAACGTATGGGTATTTAGCGATAACGTAGAGCGTTATGCCGAATT
AATGACCGGCGCGCGGCAGT

Product: electron transfer flavoprotein YdiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKIITCFKLVPEEQDITVTPEHSLNFDRAEAKISQFDLNAIEAAAQLAGGGDEIAALTVGGSLLQNSKVRKDVLSRGPDA
LFMVQDAQMEHALPKETALALASAAEKIGFDLLLFGEGSGDIYAQQVGLLTGELLKLPVINAVSHIQRDGDKIIVERTLE
EDVEIIELTLPAVLCVTSDINVPRIPSMKAILGAGKKAVTSWLASDIHWTPTTPMAELVAISVPPQTERKHIILDNDSPE
AITALADHLKKSLN

Sequences:

>Translated_254_residues
MKIITCFKLVPEEQDITVTPEHSLNFDRAEAKISQFDLNAIEAAAQLAGGGDEIAALTVGGSLLQNSKVRKDVLSRGPDA
LFMVQDAQMEHALPKETALALASAAEKIGFDLLLFGEGSGDIYAQQVGLLTGELLKLPVINAVSHIQRDGDKIIVERTLE
EDVEIIELTLPAVLCVTSDINVPRIPSMKAILGAGKKAVTSWLASDIHWTPTTPMAELVAISVPPQTERKHIILDNDSPE
AITALADHLKKSLN
>Mature_254_residues
MKIITCFKLVPEEQDITVTPEHSLNFDRAEAKISQFDLNAIEAAAQLAGGGDEIAALTVGGSLLQNSKVRKDVLSRGPDA
LFMVQDAQMEHALPKETALALASAAEKIGFDLLLFGEGSGDIYAQQVGLLTGELLKLPVINAVSHIQRDGDKIIVERTLE
EDVEIIELTLPAVLCVTSDINVPRIPSMKAILGAGKKAVTSWLASDIHWTPTTPMAELVAISVPPQTERKHIILDNDSPE
AITALADHLKKSLN

Specific function: May play a role in a redox process [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=216, Percent_Identity=28.2407407407407, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI62420877, Length=216, Percent_Identity=28.2407407407407, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=79.5275590551181, Blast_Score=420, Evalue=1e-119,
Organism=Escherichia coli, GI87081682, Length=255, Percent_Identity=54.5098039215686, Blast_Score=246, Evalue=9e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27313; Mature: 27313

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIITCFKLVPEEQDITVTPEHSLNFDRAEAKISQFDLNAIEAAAQLAGGGDEIAALTVG
CCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
GSLLQNSKVRKDVLSRGPDALFMVQDAQMEHALPKETALALASAAEKIGFDLLLFGEGSG
CHHHHCCHHHHHHHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCC
DIYAQQVGLLTGELLKLPVINAVSHIQRDGDKIIVERTLEEDVEIIELTLPAVLCVTSDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHEEEHHHHHHEEEECCC
NVPRIPSMKAILGAGKKAVTSWLASDIHWTPTTPMAELVAISVPPQTERKHIILDNDSPE
CCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCH
AITALADHLKKSLN
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKIITCFKLVPEEQDITVTPEHSLNFDRAEAKISQFDLNAIEAAAQLAGGGDEIAALTVG
CCEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
GSLLQNSKVRKDVLSRGPDALFMVQDAQMEHALPKETALALASAAEKIGFDLLLFGEGSG
CHHHHCCHHHHHHHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCC
DIYAQQVGLLTGELLKLPVINAVSHIQRDGDKIIVERTLEEDVEIIELTLPAVLCVTSDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHEEEHHHHHHEEEECCC
NVPRIPSMKAILGAGKKAVTSWLASDIHWTPTTPMAELVAISVPPQTERKHIILDNDSPE
CCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCH
AITALADHLKKSLN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]