| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yeaN [H]
Identifier: 16764629
GI number: 16764629
Start: 1354903
End: 1356087
Strand: Reverse
Name: yeaN [H]
Synonym: STM1278
Alternate gene names: 16764629
Gene position: 1356087-1354903 (Counterclockwise)
Preceding gene: 16764631
Following gene: 16764628
Centisome position: 27.92
GC content: 58.31
Gene sequence:
>1185_bases ATGACGACAGCCCTTTCACCACGCGGCAAACAGGGCGCTTTACTGATTGCCGGTATTTTGATGATAGCCACTACGCTGCG CGTAACATTTACCGGCGCTGCGCCGTTGCTGGAGACAATCCGTTCGGATTACGGTCTTTCCACCGCCCAGACGGGCCTGC TAACAACCTTGCCGCTTCTGGCGTTTGCACTGGTTTCGCCGCTGGCGGCCGGTATTGCCCGCCGGTTTGGGATGGAACGC AGTCTGTTTGCCGCAATGCTGCTGATTTGCGCGGGTATTGCTCTCCGCTCCCTGCCCTCCGCTGCATTGTTGTTTGCCGG AACTGCCATTATTGGGTGCGGGATAGCGCTGGGTAATGTGCTGCTACCAGGATTGATTAAGCGCGATTTTTCACAACATG TCGCCAGGCTGACGGGCGCGTATTCATTGACGATGGGCGCCGCCGCCGCGTTGGGGTCCGCGCTGGTGGTTCCGCTGGCG TTGCACGGTTTTGGCTGGCGCGGCGCGCTGTTAATGCTGATGCTGTTTCCGCTGTTGGCGTTTCTTATCTGGTTGCCGCA GTGGCGCACTACCCGCTCAGCTAACCTGAGTAGCTCCCGGGCATTACATGAACGCGGTATCTGGCGTTCGCCTTTAGCCT GGCAAGTTACGTTGTTTCTGGGACTTAACTCACTGATTTATTATGTGATTATCGGCTGGTTACCAACAATACTCATCAGC CACGGTTACAGCGAAGCACAGGCAGGATCGCTACATGGCCTGCTGCAACTGGCGACCGCGGCGCCTGGGTTAGCTATTCC GCTTATTTTGCATCGCTTTAACGATCAACGCTGGATTGCCGCGCTGGTCTCACTATTGTGCGCAGTGGGCGCGGCGGGGC TTTGGTTTGTGCCGGGCCAGGCGATCATCTGGACGCTACTGTTCGGCTTCGGTTCAGGCGCGACGATGATCCTCGGCCTG ACGTTTATCGGCCTGCGCGCCAGTTCGGCGCATCAGGCGGCGGCGCTTTCCGGCATGGCGCAGTCGGTCGGGTATTTACT GGCGGCATGTGGGCCGCCCGTCATGGGAAAACTTCATGATGCCAGCGGTAGCTGGTATCTACCGCTGTCAGGCGTGACGG TTCTGGCTATCATCATGGCGATTTTCGGCCTCTACGCCGGACGCGATCGAGAGATAGCGTCATAA
Upstream 100 bases:
>100_bases TATATTGTCCGATTTTAGCGATAAATTGTCATTTTAGCTTGATTCATCCAAACAGTAAAAACTGTTAAGGTATCGCCTCG CCTGACGAGATGAGAAAACG
Downstream 100 bases:
>100_bases ATAAACCTGATACCCACTTGAATGCCTGATGACGCTTCGTTTATCAGGCCTGATCCATTAAAATCATTACCGCTATCCGA CAAAAGTACCGTAAGCGACA
Product: amino acid/amine transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRSDYGLSTAQTGLLTTLPLLAFALVSPLAAGIARRFGMER SLFAAMLLICAGIALRSLPSAALLFAGTAIIGCGIALGNVLLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLA LHGFGWRGALLMLMLFPLLAFLIWLPQWRTTRSANLSSSRALHERGIWRSPLAWQVTLFLGLNSLIYYVIIGWLPTILIS HGYSEAQAGSLHGLLQLATAAPGLAIPLILHRFNDQRWIAALVSLLCAVGAAGLWFVPGQAIIWTLLFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHDASGSWYLPLSGVTVLAIIMAIFGLYAGRDREIAS
Sequences:
>Translated_394_residues MTTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRSDYGLSTAQTGLLTTLPLLAFALVSPLAAGIARRFGMER SLFAAMLLICAGIALRSLPSAALLFAGTAIIGCGIALGNVLLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLA LHGFGWRGALLMLMLFPLLAFLIWLPQWRTTRSANLSSSRALHERGIWRSPLAWQVTLFLGLNSLIYYVIIGWLPTILIS HGYSEAQAGSLHGLLQLATAAPGLAIPLILHRFNDQRWIAALVSLLCAVGAAGLWFVPGQAIIWTLLFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHDASGSWYLPLSGVTVLAIIMAIFGLYAGRDREIAS >Mature_393_residues TTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRSDYGLSTAQTGLLTTLPLLAFALVSPLAAGIARRFGMERS LFAAMLLICAGIALRSLPSAALLFAGTAIIGCGIALGNVLLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLAL HGFGWRGALLMLMLFPLLAFLIWLPQWRTTRSANLSSSRALHERGIWRSPLAWQVTLFLGLNSLIYYVIIGWLPTILISH GYSEAQAGSLHGLLQLATAAPGLAIPLILHRFNDQRWIAALVSLLCAVGAAGLWFVPGQAIIWTLLFGFGSGATMILGLT FIGLRASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHDASGSWYLPLSGVTVLAIIMAIFGLYAGRDREIAS
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=392, Percent_Identity=81.8877551020408, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1786536, Length=351, Percent_Identity=27.9202279202279, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41338; Mature: 41207
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRSDYGLSTAQTGLLTTLPLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AFALVSPLAAGIARRFGMERSLFAAMLLICAGIALRSLPSAALLFAGTAIIGCGIALGNV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLALHGFGWRGALLMLMLFPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FLIWLPQWRTTRSANLSSSRALHERGIWRSPLAWQVTLFLGLNSLIYYVIIGWLPTILIS HHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLAIPLILHRFNDQRWIAALVSLLCAVGAAGLWFVPGQ CCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHH AIIWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHD HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC ASGSWYLPLSGVTVLAIIMAIFGLYAGRDREIAS CCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTALSPRGKQGALLIAGILMIATTLRVTFTGAAPLLETIRSDYGLSTAQTGLLTTLPLL CCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AFALVSPLAAGIARRFGMERSLFAAMLLICAGIALRSLPSAALLFAGTAIIGCGIALGNV HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LLPGLIKRDFSQHVARLTGAYSLTMGAAAALGSALVVPLALHGFGWRGALLMLMLFPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FLIWLPQWRTTRSANLSSSRALHERGIWRSPLAWQVTLFLGLNSLIYYVIIGWLPTILIS HHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLAIPLILHRFNDQRWIAALVSLLCAVGAAGLWFVPGQ CCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHH AIIWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPVMGKLHD HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEC ASGSWYLPLSGVTVLAIIMAIFGLYAGRDREIAS CCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]