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The map label for this gene is yiaF [H]

Identifier: 16764543

GI number: 16764543

Start: 1273246

End: 1273989

Strand: Direct

Name: yiaF [H]

Synonym: STM1188

Alternate gene names: 16764543

Gene position: 1273246-1273989 (Clockwise)

Preceding gene: 16764542

Following gene: 16764545

Centisome position: 26.21

GC content: 46.24

Gene sequence:

>744_bases
ATGCGCTCATTTACTCAGCGTTGGGGAAAATACGTTATCGTGCCGCTCGTGATCGCGATGCTGACCGGTTGCGAAGGGAA
GGGCGATAGTTCACGACGGGCTTTCGTTGAGTATTTGAATACGCAAATCATTACGTCTCCCGTGGTGGGCGTCTGTGAGT
TGACGCCAGCCCAACGTCAGGCTTTTGGTCATTACGCCGATGACTACGATGTACTATTAACTGCCTACGGGCAAATCTTT
GCTGTGGTGTATGAGACCGGCCAGGAGGATAAGATCACCGGTGTTATTCAGTCTGAGCGTGATAATCTGGTTTTCCTGAA
CGAGCTACGTGTGGCTCGTGACGTAAACAATCGATTTATCCTTCGGTTGAAAAATGTGAGTAGTGAAAACAGAAAAAAAT
ATTCTGCTTTAAAGCTCCCCGCTGATGTGAAGCCTGTCTTTGACGCTGCGTGGAATAAAACCGTAACACCGCTGGATGAG
ACGATGACTCGCTATTATTTTCTGCGCGGAAAGCGGCTCGACCAACTGGTCGCAATGGGCGAGTTTCTGCAAAAACAGGG
AAATAAAGTCCGCTTTGAAACGAATGGAAAAGCGGTTTTTGCCGACCTGGCAGCAAAAGAACACTTTCAGGATCAACAAT
TTAATTTTTTCATTACGCAGAATGATATAAACCATCTTACTCAGCAGATGGTTGAATTTATAAATAGTCAACAAGATGCG
GCTGATGCTGGCGGCGTTAATTAA

Upstream 100 bases:

>100_bases
TTTTGCTGTATCCGACGCATTTTTACCGTTGTGCACTGTTTATTCTTGCGATCCGGATTTCGGCGCGTTTAAGGACGAAC
AGATGGCCAATACTAGCTGG

Downstream 100 bases:

>100_bases
AGGAATGTGTCGTGAGGTGAAGCAATGTTCGGGGGAGGGCGTAAACTCATCGCGAGATGGAATTTAACGAGTCGCAAAGG
GAAGGTTTCAGGACAGTAAA

Product: inner membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLTAYGQIF
AVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDE
TMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDA
ADAGGVN

Sequences:

>Translated_247_residues
MRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLTAYGQIF
AVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDE
TMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDA
ADAGGVN
>Mature_247_residues
MRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLTAYGQIF
AVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDE
TMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDA
ADAGGVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=194, Percent_Identity=28.3505154639175, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 28111; Mature: 28111

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQ
CCCHHHHHCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHH
AFGHYADDYDVLLTAYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFI
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCEEE
LRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMG
EEEECCCCCHHHHHHHEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDA
HHHHHCCCEEEEEECCCEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCC
ADAGGVN
CCCCCCC
>Mature Secondary Structure
MRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQ
CCCHHHHHCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHH
AFGHYADDYDVLLTAYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFI
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCEEE
LRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMG
EEEECCCCCHHHHHHHEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDA
HHHHHCCCEEEEEECCCEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCC
ADAGGVN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]