Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 167644760

GI number:

Start: 838718

End: 842800

Strand: Direct

Name: rpoB

Synonym: Caul_0794

Alternate gene names: NA

Gene position: NA

Preceding gene: 167644759

Following gene: 167644761

Centisome position: NA

GC content: NA

Gene sequence:

>4083_bases
ATGGCGCAATCCTTCACCGGCAAGAAGCGGATCCGGAAGTCTTTCGGCCGCATCCCCGAAGCTGTGCAGATGCCGAACCT
GATCGAGGTTCAGCGCTCCTCCTACGAACAGTTCCTGCAGCGCGAGGTCCGTCCGGGCGTGCGCAAGGACGAGGGGATCG
AAGCGGTCTTCAAGTCCGTCTTCCCGATCAAGGATTTCAACGAGCGCGCGGTGCTCGAATACGTCTCGTACGAATTCGAA
GAGCCCAAGTACGACGTTGAGGAATGCATCCAGCGCGACATGACCTTCGCGGCGCCGCTGAAGGTCAAGCTGCGGCTGAT
CGTGTTCGAAACCGAAGAAGAAACCGGCGCCCGGTCCGTCAAGGACATCAAGGAGCAGGACGTCTACATGGGCGATATCC
CGCTCATGACCGACAAGGGCACGTTCATCGTCAACGGCACCGAGCGGGTCATCGTCTCGCAGATGCACCGCTCGCCCGGC
GTGTTCTTCGACCACGACAAGGGCAAGACCCACGCCTCGGGCAAGCTGCTGTTCGCCGCCCGCGTGATCCCGTATCGCGG
TTCGTGGCTCGACTTCGAGTTCGACGCCAAGGACGTGGTCTATGTCCGCATCGACCGTCGCCGCAAGCTGCCGGCCACCA
CCTTCCTCTATGCCCTGGGCATGGACGGCGAAGAGATCCTGACCACCTTCTACGACGTCGTGCCCTTCGAGAAGCGCACC
GCGGCCGGCGCCGAAGGCTGGGCCACCCCGTACAAGCCCGAGCGCTGGCGCGGCGTGAAGCCGGAATTCGCCCTGATCGA
CGCCGACAGCGGCGAAGAAGTGGCCGCGGCCGGCACCAAGATCACCGCGCGTCAGGCCAAGAAGCTGGCTGACAATGGTC
TCAAGACCCTGCTGCTGGCCCCCGAGGCCCTGACCGGCCGCTACCTGGCCCGAGACGCCGTCAACTTCGAGACCGGCGAG
ATCTACGCCGAGGCCGGCGACGAGCTGGACGTCACCTCGATCGAGGCTCTGGCGGCCCAAGGCTTCAGCACCATCGACGT
GCTGGACATCGACCACGTCACGGTCGGCGCCTACATGCGCAACACCCTGCGCGTGGACAAGAACGCCGTCCGCGAGGACG
CGCTATTCGACATCTATCGCGTCATGCGTCCCGGCGAGCCGCCGACCGTCGAAGCCGCCGAGGCGATGTTCAAGTCGCTG
TTCTTCGACGCCGAGCGCTACGACCTGTCGGCCGTGGGCCGCGTGAAGATGAACATGCGCCTGGAGCTGGACGCTTCGGA
CGAGATGCGCGTGCTCCGCAAGGAAGACGTGCTGGCCGTCCTGAAGCTGCTAGTCGGCCTGCGCGATGGCCGCGGCGAAA
TCGACGACATCGACAACCTGGGCAACCGCCGGGTGCGTTCGGTCGGCGAACTGCTGGAAAACCAGTACCGCGTCGGCCTG
CTGCGCATGGAACGCGCCATCAAGGAACGCATGTCGTCCGTCGACATCGACACCGTGATGCCGCACGACCTGATCAACGC
CAAGCCGGCCGCGGCCTCGGTGCGTGAATTCTTCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGT
CGGAGATCACCCACAAGCGTCGTCTCTCGGCGCTTGGCCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAAGTCCGC
GACGTTCACCCGACCCACTACGGCCGCATCTGCCCGATTGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCT
GGCCACCCACGCCCGCGTCAACAAGTACGGCTTCATCGAGAGCCCCTACCGTCGCGTTGCCGACGGCAAGCCGCTCGAAG
AGGTCGTCTACATGTCGGCCATGGAAGAGTCGAAGCACGTCATCGCCCAGTCCAACATCAAGGTGTTGAACGGCGAGATC
GTCGACGACCTGGTCCCCGGCCGGATCAACGGCGAACCGACCCTGCTCCAGAAGGAGCAAGTCGACCTGATGGACGTGTC
GCCGCGTCAGGTGGTTTCGGTGGCCGCGGCCCTGATCCCCTTCCTGGAAAACGATGACGCCAACCGCGCCCTCATGGGCT
CGAACATGCAACGTCAGGCCGTGCCGCTGGTGCAGTCCGACGCCCCGCTGGTCGGCACGGGCATGGAAGCCGTCGTCGCT
CGCGACTCCGGCGCCGTGGTCATCGCCAAGCGCACCGGCGTCGTGGAGCAGATCGACGGCACCCGTATCGTCGTCCGCGC
CACGGAAGAAACCGACGCCGCCCGCTCGGGCGTCGACATCTATCGCCTGAGCAAGTTCCAGCGTTCGAACCAGTCGACCT
GCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACAAGATCAGCGCCGGCGACATCATCGCCGACGGTCCCTCGACCGAG
CTGGGCGAACTGGCCCTGGGCCGCAACGCGCTCGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAAGACTCGATCCT
GATCTCCGAGCGCATCGTCCGCGACGACGTCTTCACCTCGATCCACATCGAGGAATTCGAAGTCATGGCCCGCGATACGA
AGCTCGGTCCGGAAGAAATCACCCGCGACATCCCAAACGTCGGCGAGGAAGCCCTGCGCAACCTCGACGAAGCGGGCATC
GTGGCGATCGGCGCCGAAGTCCAGCCGGGCGACATCCTGGTCGGCAAGGTCACCCCGAAGGGCGAAAGCCCGATGACGCC
GGAAGAAAAGCTCCTGCGCGCCATCTTCGGCGAAAAGGCCTCGGACGTCCGCGACACCAGCCTGCGCCTGCCCCCGGGCG
TCGCCGGCACGATCGTCGACGTGCGGGTGTTCAACCGCCACGGCGTCGACAAGGACGAACGCGCCCTGGCCATCGAACGC
GCCGAGATCGACCGTCTGGGCAAGGACCGCGACGACGAATTCGCGATCCTGAACCGCAACATCTCGGGCCGTCTGCGCGA
ACTGCTGATCGGCAATGTCGCTCTGTCGGGTCCCAAGGGCCTGTCGCGCGGCCAGATCACCGCCGAGGGCCTGGCTGAAG
TCCAGCCGGGTCTGTGGTGGCAGATCGCCCTCGAGGACGAGAAGGCGATGGGCGAACTGGAAAGCCTGCGCCGTCTGTTT
GACGAGAACCGCAAGCGCCTGGACCGGCGCTTCGAGGACAAGGTCGACAAGCTGCAGCGCGGCGACGAACTGCCCCCGGG
CGTGATGAAGATGGTAAAGGTCTTCGTGGCCGTGAAGCGCAAGCTTCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCA
ACAAGGGCGTCATCTCGCGCATCCTGCCGATCGAGGACATGCCGTTCCTCGCCGACGGGACGCACGTGGACGTCGTTCTG
AACCCGCTGGGCGTGCCTTCGCGCATGAACGTCGGTCAGATCTTCGAAACCCACCTGGGTTGGGCCTGCGCCGGTCTCGG
CAAGCAGATCACGACCCTGCTCGAGGACTGGCAGGCCGGCGGCCAGAAGCAGGCCCTGATCGATCGTCTGACCGAAATCT
ACGGCCCGGACGAGGAACTGCCGGAAACCGAGGAAGAGCTGGTCGAACTGGCTCGCAACCTCGGCAAGGGTGTTCCGATC
GCCACCCCGGTGTTCGACGGTGCGCGTATCGGCGACATCGAGGACCACCTGCGCATGGCGGGTCTCGATCCGTCGGGCCA
GTCGATCCTGTACGACGGCCAGACCGGCGAGCAGTTCAAGCGTCCGGTCACGGTCGGCTACATCTACATGCTGAAGCTGC
ACCACCTGGTCGACGACAAGATCCACGCCCGTTCGATCGGTCCGTACTCGCTCGTCACGCAACAGCCGCTGGGTGGTAAG
GCCCAGTTCGGCGGTCAGCGCTTCGGGGAAATGGAAGTGTGGGCTCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGA
AATGCTGACGGTGAAGTCCGACGACGTGGCCGGCCGGACCAAGGTCTACGAGTCGATCGTCCGCGGCGACGACACGTTCG
AAGCCGGTATCCCGGAAAGCTTCAACGTGCTGGTCAAGGAAATGCGCTCGCTCGGCCTGAACGTCGAGCTGGAGAACAGC
TGA

Upstream 100 bases:

>100_bases
TTGCAGCGTCCAGCGTTCTCTCACGGAGAGAGCGGCGAGGGTGGACGCTAAGACATTCGAATTTACGCGCGGACTCCGTT
CCGCGCCGCAGGGAAAAAAC

Downstream 100 bases:

>100_bases
TCCGGATCTCCCTCCCCACCTTTCTTCTTCTTAGGAAGACTGAAAAGGCGGGGAGGGACCCCATCGGCCCGCTCTCCAAC
TTTGAATTTTCGCGGGTAAT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1360_residues
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQREVRPGVRKDEGIEAVFKSVFPIKDFNERAVLEYVSYEFE
EPKYDVEECIQRDMTFAAPLKVKLRLIVFETEEETGARSVKDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPG
VFFDHDKGKTHASGKLLFAARVIPYRGSWLDFEFDAKDVVYVRIDRRRKLPATTFLYALGMDGEEILTTFYDVVPFEKRT
AAGAEGWATPYKPERWRGVKPEFALIDADSGEEVAAAGTKITARQAKKLADNGLKTLLLAPEALTGRYLARDAVNFETGE
IYAEAGDELDVTSIEALAAQGFSTIDVLDIDHVTVGAYMRNTLRVDKNAVREDALFDIYRVMRPGEPPTVEAAEAMFKSL
FFDAERYDLSAVGRVKMNMRLELDASDEMRVLRKEDVLAVLKLLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGL
LRMERAIKERMSSVDIDTVMPHDLINAKPAAASVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVR
DVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYRRVADGKPLEEVVYMSAMEESKHVIAQSNIKVLNGEI
VDDLVPGRINGEPTLLQKEQVDLMDVSPRQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEAVVA
RDSGAVVIAKRTGVVEQIDGTRIVVRATEETDAARSGVDIYRLSKFQRSNQSTCINQRPLVKVGDKISAGDIIADGPSTE
LGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGI
VAIGAEVQPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGVDKDERALAIER
AEIDRLGKDRDDEFAILNRNISGRLRELLIGNVALSGPKGLSRGQITAEGLAEVQPGLWWQIALEDEKAMGELESLRRLF
DENRKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPIEDMPFLADGTHVDVVL
NPLGVPSRMNVGQIFETHLGWACAGLGKQITTLLEDWQAGGQKQALIDRLTEIYGPDEELPETEEELVELARNLGKGVPI
ATPVFDGARIGDIEDHLRMAGLDPSGQSILYDGQTGEQFKRPVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGK
AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA