Click here to switch to the map view.

The map label for this gene is ail [H]

Identifier: 16764403

GI number: 16764403

Start: 1129424

End: 1129921

Strand: Direct

Name: ail [H]

Synonym: STM1043

Alternate gene names: 16764403

Gene position: 1129424-1129921 (Clockwise)

Preceding gene: 16764402

Following gene: 16764405

Centisome position: 23.25

GC content: 44.38

Gene sequence:

>498_bases
ATGAAAAAGATTGTCGTGGCGGTTTTAGTTGGTCTGGCGTTAGGTAGCATCGGCGTGGCTAACGCAGCAGGGTATAAAAA
TACCGTTTCAATTGGATATGCCTACACAGATTTAAGCGGCTGGCTTTCCGGTAATGCGAACGGTGCCAACATCAAATATA
ACTGGGAAGATCTGGACAGTGGATTCGGGGCGATGGGTTCAGTTACATACACCTCGGCTGATGTTAATAACTATGGGTAT
AAGGTAGGTGATGCTGATTATACCTCCCTTCTTGTTGGTCCTTCATACCGTTTTAACGACTATCTGAATGCTTACGTGAT
GATTGGTGCAGCAAACGGACATATTAAGGATAACTGGGGAAATTCTGACAATAAAACCGCCTTTGCTTATGGGGCAGGTA
TTCAGCTTAACCCGGTTGAAAATATTGCCGTTAATGCGTCTTATGAGCATACAAGTTTTTCCACTGATGCTGACAGTGAC
GTCAAAGCTGGAACCTAG

Upstream 100 bases:

>100_bases
AGTATTTTTGATCGAAACGATCGATAAATATGATTGAACTTTCTAACCTGCTGCTGTTTCACTGAGCCCGCACAGTCAAT
AATCAAAAAAAGGAAATGTT

Downstream 100 bases:

>100_bases
GTGCTTGGCGCCTAGGTGCTTGGCGTAGGTTACAGCTTCTGACCTTTAACATCGATACAGATTTAATGCCCTCCAGTGAG
AGGGCTTTTTTATGGGTAAA

Product: attachment/invasion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGY
KVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSD
VKAGT

Sequences:

>Translated_165_residues
MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGY
KVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSD
VKAGT
>Mature_165_residues
MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGY
KVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSD
VKAGT

Specific function: Promotes the invasion of pathogenic bacteria into eukaryotic cells by an unknown mechanism [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=160, Percent_Identity=31.875, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 17354; Mature: 17354

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDS
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEEEHHHCCC
GFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWG
CCCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEECCCC
NSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
CCCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDS
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEEEHHHCCC
GFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWG
CCCCCCEEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEECCCC
NSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
CCCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1688838 [H]