| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764390
Identifier: 16764390
GI number: 16764390
Start: 1116367
End: 1116900
Strand: Direct
Name: 16764390
Synonym: STM1030
Alternate gene names: NA
Gene position: 1116367-1116900 (Clockwise)
Preceding gene: 16764389
Following gene: 16764391
Centisome position: 22.98
GC content: 51.5
Gene sequence:
>534_bases GTGGATCAGGAAATTAAAAGCCTCGAATTAAACATCACACAGCTTTCGGCCATCACTGGTGCACACCGACAGACCATCGC CAGCAGGCTGAAGGGCGTAAAAACCTCAGGTGGGAACGGTAGTAACCTGAAAATCTACCGGCTGGTGGATATTCTGACCG CCATGATGACGATGCCGGCTGTTACCGGGGAGAATGACCCCAATAAGATGAAACCCTCAGATCGACGGGCATGGTTTCAG TCGGAAATGACGCGTATTGAGCTGGAAAAGGAGATGAGAACTCTGATCCCGGCCAGCGAGGTGCTGAGCGTTTATGCTGT CATGGCAAAAACGGTCGTCAAGACACTGGAGATACTGCCGGACTTACTGGAAAGGGATGCGGCATTGCCGCCTGATGCGC TGGAAATGACGCAAAAAATTATTGATCAACTCAGGGAAGATCTGGCCAGCATGACATACCAGGCCTGCGCGGATGCTATA AACGGAGATGATGATGACAACGGTGACGAAGGGCAAGAGGAAGAGCAGGAATAG
Upstream 100 bases:
>100_bases CTTAAAAATCAATACATTTACTGTTTTCAGTGTCGAAGTGGTACGTTTTTTGTTCGACACTGAACGCCATTTTCACCGTA TACAGGAAAAGAGCACGACT
Downstream 100 bases:
>100_bases TTTAGCCTCTGCCGTTGTTGCCGGATGTGATATCTCATCGATGTTCAGGCCGCCGCGCAGGATGAAAATATCGGATGCGG TCAGAAAATATATGCGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQ SEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAI NGDDDDNGDEGQEEEQE
Sequences:
>Translated_177_residues MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQ SEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAI NGDDDDNGDEGQEEEQE >Mature_177_residues MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQ SEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAI NGDDDDNGDEGQEEEQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19658; Mature: 19658
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC VTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC VTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA