Click here to switch to the map view.

The map label for this gene is quuQ [H]

Identifier: 16764382

GI number: 16764382

Start: 1111509

End: 1112306

Strand: Direct

Name: quuQ [H]

Synonym: STM1022

Alternate gene names: 16764382

Gene position: 1111509-1112306 (Clockwise)

Preceding gene: 39980852

Following gene: 16764383

Centisome position: 22.88

GC content: 46.37

Gene sequence:

>798_bases
ATGAATCTTGAGTCCTTACCGAAATATTTTTCACCTAAATCCATGATGCCCGGCGCAGTACCATGCGGAATAACGTCTGA
TACGCTGACTATTACTGACGTAATGGCATCTCTCGGGCTACTTACTGCAAAAGCCGCAGTGGGTATTGAATTGTATCTGG
CAAAAGCCGGGGTTTTATCTTCTGAAAATATCATCGCCTACATCAGGCAATTAGCAGAGCAGCGTGCAGAACGGCATGGG
GCATTACGGAAAATGGAAAAGGGTAAGCGCTCAAAATTTCTCGACACTATGGCGCGTTATGTATTTCGCGATTATTCCCT
CAGTGCGGCCAGCTTGGTGACGTGCAGTAGCTGTCATGGTGCTAAATTAATTGATGCTGAGGTTTTCACGAACAAGGTTA
CTTACCCGGATGGTAAGCCACCAAAATGGGTAAAAGATACGAAAGGTATTTCTCCGTCCGACTGGGAGGTGTGGAAATCA
GTTCGTGAGCAGGTGCGCGTAGTGTGTAAGGCGTGTGATGGCAAAGGCCATGTGAAAAATGAATGTCGTTGCCGGGGACG
CGGAGAAATTCTCGATAAGAAAAAATCTGAGTTGCAGGGCGTGCCGGTTTATAAAAAATGCCCAAGATGCAAGGGAAGAG
GCTACCCACGTCTCAAAGATACCGAGATTTTTAAAGCACTAGGAGTAACGGAAATGGTATGGCGGTACAACTATAAACTG
TTTTTCGATCGGCTGGTGGAGCATTGCCATATTGAGGAATCGTATGCAGAAAAGGTTCTGGGAAACGTGACTCGATGA

Upstream 100 bases:

>100_bases
TGGTTGCGTCTCCGAATTTATCGATACCGGGGATCTTTTCCTGTGGCATATCGCATTCTTCGTAATTACGTCCGCATTGA
AGCAAAACGGGAGCATCGAA

Downstream 100 bases:

>100_bases
CCAAAATAATTTAGCTATTGCAAAATTAACGGAAAATGGCTAATCTGATTCCAACGATGGGTTATTATGCCTGTGACGTT
ACAAGAATTAAGAACCTCGC

Product: molecular chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHG
ALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKS
VREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKL
FFDRLVEHCHIEESYAEKVLGNVTR

Sequences:

>Translated_265_residues
MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHG
ALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKS
VREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKL
FFDRLVEHCHIEESYAEKVLGNVTR
>Mature_265_residues
MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHG
ALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKS
VREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKL
FFDRLVEHCHIEESYAEKVLGNVTR

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081935, Length=271, Percent_Identity=34.3173431734317, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003222
- InterPro:   IPR001305 [H]

Pfam domain/function: PF03589 Antiterm [H]

EC number: NA

Molecular weight: Translated: 29826; Mature: 29826

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]