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The map label for this gene is ycaO [H]

Identifier: 16764335

GI number: 16764335

Start: 1058700

End: 1060460

Strand: Reverse

Name: ycaO [H]

Synonym: STM0975

Alternate gene names: 16764335

Gene position: 1060460-1058700 (Counterclockwise)

Preceding gene: 16764350

Following gene: 16764334

Centisome position: 21.83

GC content: 52.75

Gene sequence:

>1761_bases
ATGACGCAAACATTTATTCCCGGCAAAGACGCCGCGCTGGAAGACTCCATCGCCCGCTTCCAGCAAAAGTTACTCGACCT
CGGCTTTCACATCGAAGAGGCCTCCTGGCTGAACCCGGTGCCAAACGTCTGGTCAGTGCATATTCGCGATAAAGAGTGCG
CGTTATGCTTTACCAACGGAAAAGGCGCGACCAAAAAAGCGGCGCTGGCCTCGGCGCTGGGCGAATACTTCGAGCGTCTG
TCAACCAACTACTTCTTTGCTGATTTCTGGCTTGGCGAAACGGTCGCCAATGGGCCATTCGTGCATTACCCGAACGAAAA
GTGGTTCCCGCTGACTGAAAATGACGACGTACCGGAAGGCTTGCTTGATGCCCGTCTGCGCGCGTTTTACGATCCGGAAA
ATGAACTCACCGGAAGCCAGTTAATTGATCTTCAGTCCGGCAATGAAGCTCGCGGCGTCTGCGGCCTGCCATTTACCCGT
CAGTCCGATAACCAGACCGTGTATATTCCGATGAATATCATCGGCAACCTGTACGTCTCTAACGGAATGTCCGCCGGCAA
TACGCGTAATGAAGCCCGCGTTCAGGGACTGTCGGAAGTCTTCGAGCGTTATGTGAAAAATCGCATCATTGCGGAAAGTA
TCAGTCTGCCGGAGATTCCCGCAGAGGTGATGGCGCGTTATCCGGCGGTAATGGAGTCAATCGCCACGCTGGAAGCCGAG
GGTTTCCCGATTTTCGCCTATGACGGCTCGCTGGGCGGTAAGTATCCGGTTATCTGCGTCGTGCTGTTCAACCCGGCTAA
CGGTACCTGCTTTGCTTCTTTTGGCGCCCATCCTGACTTTGGCGTTGCGCTGGAGCGTACAGTGACCGAGCTACTCCAGG
GACGCGGTCTGAAAGATCTTGATGTCTTCACGCCACCAACGTTCGATGATGAAGAAGTCGCGGAGCACACTAATCTGGAG
ACCCACTTCATCGACTCCAGCGGCCTGATTTCCTGGGATCTGTTCAAACAGGACGCCGATTATCCGTTCACGGACTGGAG
TTTTTCCGGCACTACCGAAGAAGAATTCGCCACGCTGATGGCCATCTTTGCTGCTGAAGATAAAGAAGTTTACATTGCCG
ATTACGAGCATCTCGGCGTATACGCCTGTCGTATTATCGTACCGGGAATGTCTGATATTTATCCTGCCGAAGATCTGTGG
CTGGCCAACAACAATATGGGTAGCCATCTTCGTGAGACTCTGCTTTCGCTGCCCGGTAGCGCCTGGAATAAAGAAGATTA
TCTCAATCTGATTGAACAATTGGATGAAGAAGGTTTTGACGATTTCACCCGCGTGCGTGAACTGTTGGGTCTGGCGACCG
GAGCGGACAATGGTTGGTATACACTGCGCGTCGGCGAATTAAAAGCAATGTTAGCGTTAGCGGGCGGCGATTTGGAGCAG
GCGCTAATCTGGACAGAATGGACGATGGAGTTCAATTCGTCGGTCTTTAGTCCGACACGCGCAAACTATTACCGTTGCCT
GCAAACTCTGCTGCTCCTGTCGCAAGAAGATGCGCGTCAGCCACTGCAATATCTCAATGCTTTTATAAAAATGTATGGCG
CAGAGGCTGTAGAGGCCGCCAGCGCCGCGCTTAGCGGTGAAGCGGCTTTTTATGGACTACCGGCTGTCGACCACGATCTA
CAAGCGTTCCCGGCGCATCAGTCCTTGTTAAAAGCGTATGATAAATTACAGCGCGCGAAAGCGGCATACTGGTCAAAATA
A

Upstream 100 bases:

>100_bases
ATAGCCAATACTTTTATTTCCGCCGATGTCCCGGCGAGATAGCGCCCGTCACATAAAACCCGTATCATTGCGCGCTTTCC
GTACGACAAAAGTGATTTTC

Downstream 100 bases:

>100_bases
GGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCGTTTTATTT
ATTTTCGCTAAACGGCGAAA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAE
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQ
ALIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDL
QAFPAHQSLLKAYDKLQRAKAAYWSK

Sequences:

>Translated_586_residues
MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERL
STNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTR
QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAE
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLE
THFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLW
LANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQ
ALIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDL
QAFPAHQSLLKAYDKLQRAKAAYWSK
>Mature_585_residues
TQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLS
TNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTRQ
SDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAEG
FPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLET
HFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWL
ANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQA
LIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDLQ
AFPAHQSLLKAYDKLQRAKAAYWSK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=93.1740614334471, Blast_Score=1125, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65343; Mature: 65212

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCEEECCCCCCCCCCCCCCCCHH
LLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCHHEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHH
AIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCC
AWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHH
SAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK
HHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEG
CCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCEEECCCCCCCCCCCCCCCCHH
LLDARLRAFYDPENELTGSQLIDLQSGNEARGVCGLPFTRQSDNQTVYIPMNIIGNLYVS
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCHHEE
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATLEAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
CCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLM
CCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHH
AIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGS
HHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCC
AWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGDLEQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCHHH
ALIWTEWTMEFNSSVFSPTRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAA
EEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHH
SAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK
HHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]