| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yhhW [C]
Identifier: 16764312
GI number: 16764312
Start: 1028376
End: 1029236
Strand: Reverse
Name: yhhW [C]
Synonym: STM0951
Alternate gene names: 16764312
Gene position: 1029236-1028376 (Counterclockwise)
Preceding gene: 16764314
Following gene: 16764311
Centisome position: 21.19
GC content: 56.21
Gene sequence:
>861_bases ATGAAACAGATTACAGGCGTCTATACCGCACCTCGCCCGCACTGGGTTGGCGATGGATTTCCGGTTCGTTCACTCTTTTC TTATCAGTCACATGCGCAGCAGTTGAGTCCCTTCCTGCTGCTGGATTATGCCGGGCCGCACACCTTTACGCCGGGTAATG AAAAACGCGGCGTTGGGGAGCATCCACACCGCGGTTTCGAGACCGTGACGATTGTTTATAGTGGCGAAGTCGAGCATCGG GACTCTACCGGTCGCGGCGGCGTTATCGGCCCGGGCGACGTTCAGTGGATGACCGCAGGCGCAGGCATTTTGCATGAAGA GTTCCATTCCGACGCGTTTACCCGTCGGGGCGGCGAACTGGAAATGGTGCAGTTGTGGGTTAACCTTCCCATGAAGGACA AAATGACCACCCCGGGTTATCAAAGCATTACCCACGATGTTATCCCGACCGTTACGTTGCCGGATAACGCCGGAGTCGTG CGGGTCATCGCAGGGCGTTATGAAGAGACAAAAGGCCCGGCGCACACTTTCTCGCCGCTCAATGTCTGGGATATGCGCCT GCAACGCAATCGCCAGCTTACATTGGCACAGCCGGAAGGATGGAGCACCGCGCTGGTGGTACTGAAAGGCAATATCACGG TGAACGGCACGACGCCGGTCAACGAAGCGCAACTGGTGGTGTTGAGCCAGCAAGGGAAAACGCTGCACCTTGAGGCCAGC AGCGACGCCAGCGTATTGCTGTTATCAGGCGAGCCACTGAATGAACCGATTGTGGGTTACGGCCCATTTGTTATGAACAC GAAACAAGAGATCGCAGAAGCAGTTCGCGATTTCAACTCCGGCCGTTTTGGCCAAATCTGA
Upstream 100 bases:
>100_bases CCTATTAATGGAACGGTATGAGCCATTTTAGCCACTACCGAACCTTTTGTCATGAATATAAGCTTATTCACATCAAGACA ACGCCACTGAGGAGAACACC
Downstream 100 bases:
>100_bases AAACATGAAGGAGAATACGATGTCAAGTCCTGCTAATTTTAATGGTTTGCGCCCGGTAATTGATGTTAACGATTCCGTGA TGCTTTTAATCGATCATCAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLSPFLLLDYAGPHTFTPGNEKRGVGEHPHRGFETVTIVYSGEVEHR DSTGRGGVIGPGDVQWMTAGAGILHEEFHSDAFTRRGGELEMVQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDNAGVV RVIAGRYEETKGPAHTFSPLNVWDMRLQRNRQLTLAQPEGWSTALVVLKGNITVNGTTPVNEAQLVVLSQQGKTLHLEAS SDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI
Sequences:
>Translated_286_residues MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLSPFLLLDYAGPHTFTPGNEKRGVGEHPHRGFETVTIVYSGEVEHR DSTGRGGVIGPGDVQWMTAGAGILHEEFHSDAFTRRGGELEMVQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDNAGVV RVIAGRYEETKGPAHTFSPLNVWDMRLQRNRQLTLAQPEGWSTALVVLKGNITVNGTTPVNEAQLVVLSQQGKTLHLEAS SDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI >Mature_286_residues MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLSPFLLLDYAGPHTFTPGNEKRGVGEHPHRGFETVTIVYSGEVEHR DSTGRGGVIGPGDVQWMTAGAGILHEEFHSDAFTRRGGELEMVQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDNAGVV RVIAGRYEETKGPAHTFSPLNVWDMRLQRNRQLTLAQPEGWSTALVVLKGNITVNGTTPVNEAQLVVLSQQGKTLHLEAS SDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=259, Percent_Identity=34.7490347490347, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI4505823, Length=259, Percent_Identity=34.7490347490347, Blast_Score=145, Evalue=4e-35, Organism=Escherichia coli, GI1789847, Length=199, Percent_Identity=28.643216080402, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31380; Mature: 31380
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLSPFLLLDYAGPHTFTPGNEKRGVGE CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSDAFTRRGGEL CCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCE EMVQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDNAGVVRVIAGRYEETKGPAHTFSPL EEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCC NVWDMRLQRNRQLTLAQPEGWSTALVVLKGNITVNGTTPVNEAQLVVLSQQGKTLHLEAS CHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEECCCCCCCCEEEEEEECCCCEEEEECC SDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI CCCEEEEEECCCCCCCCEECCCEEECCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAQQLSPFLLLDYAGPHTFTPGNEKRGVGE CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSDAFTRRGGEL CCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCE EMVQLWVNLPMKDKMTTPGYQSITHDVIPTVTLPDNAGVVRVIAGRYEETKGPAHTFSPL EEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCC NVWDMRLQRNRQLTLAQPEGWSTALVVLKGNITVNGTTPVNEAQLVVLSQQGKTLHLEAS CHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEECCCCCCCCEEEEEEECCCCEEEEECC SDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI CCCEEEEEECCCCCCCCEECCCEEECCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]