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The map label for this gene is insF7 [C]

Identifier: 16764309

GI number: 16764309

Start: 1026087

End: 1026770

Strand: Reverse

Name: insF7 [C]

Synonym: STM0947

Alternate gene names: 16764309

Gene position: 1026770-1026087 (Counterclockwise)

Preceding gene: 16764310

Following gene: 16764305

Centisome position: 21.14

GC content: 50.44

Gene sequence:

>684_bases
ATGCAGGCCGATAAAACGCTGAATATCGGACGGGACCGTCTGTTTAATCTGCTGGGTGAATACCGGCTCCTGGTACCCGT
GAAACGGGCATATCACAAAACCACCAACAGCCATCATCGCTTTTACCGGCATCCTAATCTGCTGAAACCCGGCCCTGAAC
AGGTTACCGCCCTTGAGCCAGAGCAGGTCTGGGTCGCCGATATTACTTACCTTCCACTACGCAGCGGCACGGCCTGTCTG
AGTCTGGTCACCGATGCCTGCTCCAGAAAAATCGTGGGTTACCATGTCGGGGAAAACCTGCAGACAGAAAATGTGGTAAA
GGCGTTCAGGCAGGCTCTGAGGCGGAGAAAAACGACAGGTCCGCTGGTACATCACTCTGACAGAGGACTGCAATACTGTT
CGGTACTTTATCAGTCAGTTCATGAGCGAAACGGAATAACCTGTTCAATGACCGATGGTTACGACTGCTACCAGAATGCG
CTGGCTGAGAGAATAAACGGGATACTGAAAAATGAGTTTTTACTCTCGCGTCCTGCAGACCTGGAGCAAGCGCGGGAAAT
AGTAAAAGAGTCCGTGGCAATTTATAACCATGAACGGCCACACCTGGCCCTGAAATACAAAACGCCCGATGATGTTCATC
AGGCGTTTTACAGACAAAAAACTGTCAACCTATATCAGGACTAG

Upstream 100 bases:

>100_bases
TAAACGGCAGGAGCATCATGCTCAGGTTCTTGATTTTGTTGCCCGTACCCGGTGCCGCCAGCCGCGAATCGGTACGCGTA
AACTGCACTATCTGCTGAAC

Downstream 100 bases:

>100_bases
TCAATAAAGCCACCCTACAGGGGGGATGAGAACACCCGACCGGGGTTCGACACAAAAACGCCGGGAGCGTTTTTGAACAG
AGCTTGCTCTGGCCCCGAAG

Product: integrase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACL
SLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNA
LAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD

Sequences:

>Translated_227_residues
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACL
SLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNA
LAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
>Mature_227_residues
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACL
SLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNA
LAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=134, Percent_Identity=38.8059701492537, Blast_Score=95, Evalue=4e-20,
Organism=Escherichia coli, GI1788405, Length=170, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787263, Length=170, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1786753, Length=170, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1786570, Length=170, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1786490, Length=170, Percent_Identity=32.3529411764706, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789981, Length=166, Percent_Identity=30.7228915662651, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 26189; Mature: 26189

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHEECCC
EQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTG
CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPAD
CCEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHEECCC
EQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTG
CCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPAD
CCEECCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD
HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]