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The map label for this gene is ybjT [H]

Identifier: 16764295

GI number: 16764295

Start: 1007623

End: 1009056

Strand: Reverse

Name: ybjT [H]

Synonym: STM0933

Alternate gene names: 16764295

Gene position: 1009056-1007623 (Counterclockwise)

Preceding gene: 16764296

Following gene: 16764294

Centisome position: 20.77

GC content: 58.02

Gene sequence:

>1434_bases
GTGGCGCAACGCATTCTGGTTCTCGGCGCCAGCGGCTATATCGGCCAGCACCTGGTCTTTGCGCTAAGTCAGCAAGGGCA
TCAGGTGCGAGCGGCGGCGCGACGCATCGAACGTCTGGAAAAACAGCGCCTCGCCAACGTCAGTTGTCATAAGGTCGATC
TGCACTGGCCGGAAAATTTACCCGCGCTGCTTCGCGACATTGATACCGTTTACTATCTGGTACACGGCATGGGCGAAGGC
GGCGATTTTATCGCCCATGAGCGTCAGGCGGCGCTCAACGTGCGCGACGCGCTGCGCCAGACGCCGGTTAAACAACTTAT
TTTCCTCAGTTCACTGCAGGCACCGGCGCATGAGCAATCCGATCACCTGCGCGCCCGCCAGCTTACGGCTGACACGCTGC
GCGACGCAGGCGTACCGGTGACGGAATTACGCGCCGGGATCATCGTCGGCGCAGGCTCCGCCGCCTTCGAAGTCATGCGC
GACATGGTTTACAACCTGCCAATACTCACGCCGCCGCGCTGGGTGCGTTCGCGCACCACGCCCATCGCTCTGGAAAATTT
ACTCTACTACCTGGTCGGCTTACTGGACCACCCTGCTCGCGAGCATCGTATTCTGGAAGCCGCCGGGCCGCAGGTATTAA
GTTATCAGCAGCAGTTTGAACGTTTTATGGCCGTCAGCGGTAAACGGCGTCCGCTGATCCCGGTGCCTTTTCCGACCCGC
TGGATTTCGGTCTGGTTTTTAAACGTCATTACCTCCGTGCCGCCAACTACCGCAAAAGCGTTAATCCAGGGATTAAGGCA
CGATTTGCTGGCCGATGACGCCGCGTTAAAAAAGTTGATCCCCCAAACGCTTATCACCTTTGATGACGCCGTTCGCCGCA
CGCTGAAAGAAGAAGAAAAACTGGTGAACTCCAGCGACTGGGGCTACGACGCGCTGGCCTTCGCCCGCTGGCGTCCCGAA
TACGGCTATTTTCCAAAGCAGGCGGGCTTTACCGCGCAGACCCCGGCCAGCCTATCGGCGCTATGGCAGGTCGTAAATCG
GCTGGGTGGCAAAGAGGGCTATTTTTTCGGCAATATTTTGTGGCAGACGCGCGCCGCGATGGACCGTCTGGTGGGGCATA
AACTGGCGAAAGGCCGCCCGTCGCATACCTTGCTCAAGCCTGGCGATACGGTAGATAGCTGGAAAGTGATCATTGTCGAA
CCAGAAAAACAGCTCACGCTCTTGTTTGGCATGAAAGCGCCGGGTCTGGGGCGGCTTAGCTTCACGCTGCACGATAAAGG
CCGCTACCGCGAAATTGACGTGCGCGCCTGGTGGCATCCACACGGAATGCCGGGCCTGATTTACTGGCTACTGATGATCC
CGGCGCACCTGTTTATTTTCCGGGGAATGGCAAGGCGTATTGCCCGACTTGCAGAACAAATCACAGAAAAATGA

Upstream 100 bases:

>100_bases
CCGATTGTGCGTCTGGTGACGCATCTGGATGTCTCTCGCGAACAGCTTACCGACGTCGTCGCCCACTGGCGCGCCTTTTT
AGCCCGCTAAGGAGAGCAAC

Downstream 100 bases:

>100_bases
GAAAAAGTTGCTGTATTCTTTCGTGTTTCCCATTGCATACCGACGTAATTCACGGAAGAATGCGCACGACGGTTTATTAA
ACACAGTGGATTGATATGAA

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAQRILVLGASGYIGQHLVFALSQQGHQVRAAARRIERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEG
GDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLDHPAREHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTR
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWRPE
YGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVE
PEKQLTLLFGMKAPGLGRLSFTLHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK

Sequences:

>Translated_477_residues
MAQRILVLGASGYIGQHLVFALSQQGHQVRAAARRIERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEG
GDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLDHPAREHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTR
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWRPE
YGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVE
PEKQLTLLFGMKAPGLGRLSFTLHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
>Mature_476_residues
AQRILVLGASGYIGQHLVFALSQQGHQVRAAARRIERLEKQRLANVSCHKVDLHWPENLPALLRDIDTVYYLVHGMGEGG
DFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQSDHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRD
MVYNLPILTPPRWVRSRTTPIALENLLYYLVGLLDHPAREHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTRW
ISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEKLVNSSDWGYDALAFARWRPEY
GYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNILWQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEP
EKQLTLLFGMKAPGLGRLSFTLHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=476, Percent_Identity=84.453781512605, Blast_Score=830, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53995; Mature: 53864

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRILVLGASGYIGQHLVFALSQQGHQVRAAARRIERLEKQRLANVSCHKVDLHWPENL
CCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PALLRDIDTVYYLVHGMGEGGDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
DHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPILTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLYYLVGLLDHPAREHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDALAFARWRPEYGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNIL
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
WQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEPEKQLTLLFGMKAPGLGRLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEE
FTLHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQRILVLGASGYIGQHLVFALSQQGHQVRAAARRIERLEKQRLANVSCHKVDLHWPENL
CCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PALLRDIDTVYYLVHGMGEGGDFIAHERQAALNVRDALRQTPVKQLIFLSSLQAPAHEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
DHLRARQLTADTLRDAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPILTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLYYLVGLLDHPAREHRILEAAGPQVLSYQQQFERFMAVSGKRRPLIPVPFPTR
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WISVWFLNVITSVPPTTAKALIQGLRHDLLADDAALKKLIPQTLITFDDAVRRTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDALAFARWRPEYGYFPKQAGFTAQTPASLSALWQVVNRLGGKEGYFFGNIL
HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHH
WQTRAAMDRLVGHKLAKGRPSHTLLKPGDTVDSWKVIIVEPEKQLTLLFGMKAPGLGRLS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEE
FTLHDKGRYREIDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMARRIARLAEQITEK
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]