Click here to switch to the map view.

The map label for this gene is stfQ [H]

Identifier: 16764288

GI number: 16764288

Start: 999070

End: 1001442

Strand: Direct

Name: stfQ [H]

Synonym: STM0926

Alternate gene names: 16764288

Gene position: 999070-1001442 (Clockwise)

Preceding gene: 39546306

Following gene: 16764289

Centisome position: 20.57

GC content: 58.24

Gene sequence:

>2373_bases
ATGCCAGTACTTATTTCCGGCGTACTGAAAGATGGTACGGGAATGCCGGTACAGAACTGCACCATTCAGCTGAAGGCCTG
CCGGACCAGTACGGCGGTGGTCGTGAATACGGTGGCATCGGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGG
AGCAGGGGCAGTACACTGTCACACTCCTGGTGGAAGGGTATCCCCCTTCACCTGCCGGAGTTATTACGGTCTACGTTGAT
TCAAAACCGGGAACCCTGAATGATTTTCTGGGGGCCATGACGGAAGACGACGTCCGCCCGGAGGCTCTTCGGCGTTTTGA
GGCGATGGTGGAAGAAGTTGCCCGCCAGGCATCGGAGGCATCGCGGAATGCCACCGCCGCAGGGCAGGCATCTGAACAGG
CGCAGACATCAGCAGGTCAGGCGGCGGAAAGCGCCACGGCAGCAGCTAGTGCAGCCGGAGCGGCAGACGCATCAGCCACA
CAGGCGGCCTCATCCGCAGCGTCTGCGGAGAGCAGCGCAGGTACGGCGACCACAAAAGCCGGGGAGGCATCAGCCAGCGC
GGCGTCGGCTGACACAGCCAGAACGGCGGCAGCCGCATCGGAGGCCGCAGCGAAAACATCTGAAGCGAATGCAGATGCCT
CCCGTACTGCCGCCGGAGATTCAGCTGCTGCCGCAGCCGCCAGCGCGACGGCGGCGCAGACATCAGCAGAGCGCGCCGGA
GCATCCGAAACCGCCGCGAAGACGTCAGAAACGCAGGCGGCTTCCAGTGCCGGTGATGCAGGTGCGTCAGCCACTGCGGC
GGCAGCGTCGGAAAAGGCGGCAGCCGCATCGGCAGCCGAAGCAAAAACATCTGAGACAAACGCAGCAACGTCAGCAAGTA
CAGCAGCGGCCAGCGCAACAGCCGCCTCGTCATCAGCATCGGAGGCATCCACCCACGCCGCCGCATCTGATACCAGCGCA
TCACTGGCAGCGCAAAGCAGAGCTGCTGCCGGAGAATCGGCAACCAGAGCCGAAGAGGCCGCGAAACGGGCCGAAGATAT
TGCGGACGTGATTTCCCTGGAAGATGCCAGCCTGACGAAAAAAGGCATCGTTCAGTTGAGCAGCGCCACGGACAGTGACA
GCGAAGCGCTGGCGTCCACACCAAAAGCGGTAAAAACCGTTATGGGTGAGGTACAGACCAAAGCCCCGCTGGACAGTCCG
GCGCTGACCGGTACGCCAACGGCACCAACGCCGGAAACCACAGCTGCAGGTATTGAAATTGCCACGGCAGCGTTTGTGGC
TGCGAAAGTGGCACAGTTGGTTGGTTCTGCGCCGGAAGCGCTGGACACGCTGAAAGAACTGGCTGACGCGCTGGGTAACG
ATCCTAATTTTGCTACCACGGTACTGAATAAACTGGCGGGCAAGCAGCCGCTGGACGATACACTGACGGCGCTGTCAGGA
AAAAGCGTTGACGGTCTTATCGAATACATTGGTTTAAGGAACACAATTGACAAGGCTGCCGGTGCTTTGCCCGCTGGTGG
TACAGCTGTTGCGGCAAACAGACTGGTGTCACGCGGCGCACTTCCGGCACTGACTGGTACGACAAGAGGCAGTGATAGCG
GCCTGATAATGGGCGAGGTCTACAACAATGGCTATCCGACGCAATACGGAAATATTTTACGTCTGACCGGAACCGGTGAT
GGGGAAATCCTCATTGGCTGGAGCGGGGCAAACGGTGCGCCAGCGCCCGCATATATTCGCAGCCATCGTGATACCGCCGA
CGCTGAGTGGTCCGAATGGGCAATGCTCTACACCACACTAAACCCACCTCCGGATTCGCATCCAGTAGGGGCGGCGATTG
CATGGCCATCTGATGCTACTCCGGCAGGTTACGCTCTGATGCAGGGGCAATCGTTTGATAAATCTGCTTACCCGTTACTG
GCTATAGCGTATCCGTCCGGCGTTATTCCTGACATGCGAGGCTGGACAATCAAAGGTAAACCCGCCAGCGGTCGCGCAGT
GTTGTCACAGGAAATGGACGGCAACAAATCGCACTCGCACACGGCGCGGGCACAGGATACCGACTTAGGGACAAAAACCA
CCTCATCATTTGATTACGGCACGAAATCGACCAATACAACGGGCGGCCATACACATGAGTTTGGCGGTTATATCAATTCA
TACTGGGGAGACTCAAATCACACCTCATTTCAGCCTGGAGGTGGTGCGTGGACACAGGCCGCTGGCGACCATGCGCATAC
AGTTTATATCGGAGGACACGAGCACACCATGTATATCGGCCCACACGGACACGTCGTTATTGTGGACGCAGATGGTAATG
CGGAAACCACGGTTAAAAACATTGCATTTAACTACATAGTGAGGCTGGCATAA

Upstream 100 bases:

>100_bases
AGCGATCTGATTCTGATGGTTGTTAAAAAATCCACTGCAGGGATTCGTATCAGTTAAATCATTAAGAGCCGCGTAAAGCG
GCTTTTTTTATGGAGGCAAT

Downstream 100 bases:

>100_bases
TGCCTTTTAAAATGAGCAGCAAAGCGCAGACTATTAAAATTTTCAATCTGCGTTCAGATACAAACGAATTTATTGGGGCA
GGTGATGCGTATATCCCGCC

Product: minor tail protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 790; Mature: 789

Protein sequence:

>790_residues
MPVLISGVLKDGTGMPVQNCTIQLKACRTSTAVVVNTVASENPDEAGRYSMDVEQGQYTVTLLVEGYPPSPAGVITVYVD
SKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAASAAGAADASAT
QAASSAASAESSAGTATTKAGEASASAASADTARTAAAASEAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAG
ASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAEAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSA
SLAAQSRAAAGESATRAEEAAKRAEDIADVISLEDASLTKKGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDSP
ALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSG
KSVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGD
GEILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLL
AIAYPSGVIPDMRGWTIKGKPASGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDYGTKSTNTTGGHTHEFGGYINS
YWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA

Sequences:

>Translated_790_residues
MPVLISGVLKDGTGMPVQNCTIQLKACRTSTAVVVNTVASENPDEAGRYSMDVEQGQYTVTLLVEGYPPSPAGVITVYVD
SKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAASAAGAADASAT
QAASSAASAESSAGTATTKAGEASASAASADTARTAAAASEAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAG
ASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAEAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSA
SLAAQSRAAAGESATRAEEAAKRAEDIADVISLEDASLTKKGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDSP
ALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSG
KSVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGD
GEILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLL
AIAYPSGVIPDMRGWTIKGKPASGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDYGTKSTNTTGGHTHEFGGYINS
YWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
>Mature_789_residues
PVLISGVLKDGTGMPVQNCTIQLKACRTSTAVVVNTVASENPDEAGRYSMDVEQGQYTVTLLVEGYPPSPAGVITVYVDS
KPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAASAAGAADASATQ
AASSAASAESSAGTATTKAGEASASAASADTARTAAAASEAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGA
SETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAEAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSAS
LAAQSRAAAGESATRAEEAAKRAEDIADVISLEDASLTKKGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDSPA
LTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGK
SVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDG
EILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLA
IAYPSGVIPDMRGWTIKGKPASGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDYGTKSTNTTGGHTHEFGGYINSY
WGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI1787829, Length=320, Percent_Identity=58.75, Blast_Score=335, Evalue=9e-93,
Organism=Escherichia coli, GI87081892, Length=280, Percent_Identity=53.5714285714286, Blast_Score=260, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011083
- InterPro:   IPR005003 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber [H]

EC number: NA

Molecular weight: Translated: 79050; Mature: 78919

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLISGVLKDGTGMPVQNCTIQLKACRTSTAVVVNTVASENPDEAGRYSMDVEQGQYTV
CCEEEEEHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEE
TLLVEGYPPSPAGVITVYVDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEA
EEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRNATAAGQASEQAQTSAGQAAESATAAASAAGAADASATQAASSAASAESSAGTATTKA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GEASASAASADTARTAAAASEAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCC
ASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAEAKTSETNAATSASTAAASAT
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AASSSASEASTHAAASDTSASLAAQSRAAAGESATRAEEAAKRAEDIADVISLEDASLTK
HCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCH
KGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDSPALTGTPTAPTPETTAAGIEI
HHHEEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ATAAFVAAKVAQLVGSAPEALDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCC
KSVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
YNNGYPTQYGNILRLTGTGDGEILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTL
ECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEC
NPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGK
CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEECC
PASGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDYGTKSTNTTGGHTHEFGGYINS
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHH
YWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKN
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCHHHHHH
IAFNYIVRLA
HHHHHHEECC
>Mature Secondary Structure 
PVLISGVLKDGTGMPVQNCTIQLKACRTSTAVVVNTVASENPDEAGRYSMDVEQGQYTV
CEEEEEHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEECCCCCEEE
TLLVEGYPPSPAGVITVYVDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEA
EEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SRNATAAGQASEQAQTSAGQAAESATAAASAAGAADASATQAASSAASAESSAGTATTKA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
GEASASAASADTARTAAAASEAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCC
ASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAEAKTSETNAATSASTAAASAT
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
AASSSASEASTHAAASDTSASLAAQSRAAAGESATRAEEAAKRAEDIADVISLEDASLTK
HCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCH
KGIVQLSSATDSDSEALASTPKAVKTVMGEVQTKAPLDSPALTGTPTAPTPETTAAGIEI
HHHEEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ATAAFVAAKVAQLVGSAPEALDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCC
KSVDGLIEYIGLRNTIDKAAGALPAGGTAVAANRLVSRGALPALTGTTRGSDSGLIMGEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
YNNGYPTQYGNILRLTGTGDGEILIGWSGANGAPAPAYIRSHRDTADAEWSEWAMLYTTL
ECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEC
NPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGK
CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEECC
PASGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDYGTKSTNTTGGHTHEFGGYINS
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHH
YWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKN
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCHHHHHH
IAFNYIVRLA
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]