| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764285
Identifier: 16764285
GI number: 16764285
Start: 994231
End: 994908
Strand: Direct
Name: 16764285
Synonym: STM0923
Alternate gene names: NA
Gene position: 994231-994908 (Clockwise)
Preceding gene: 16764284
Following gene: 39546306
Centisome position: 20.47
GC content: 59.0
Gene sequence:
>678_bases ATGGCAACGCCGCACACACTCGATATGGCGACACCGGGCATGGCACGAGTCTGCCTTCACGGGGATTTACAACGATTTGG CCGCCGCTTTAGCTTCAGTATAAAAACGGGGGCCGAGGCTATTTACGCGCTGGCCGTGCAGATACCGGGCTTCCGGCAGA AAATGAACGAGGGCTGGTATCAGATACGCATCGCCGGTCAGGATGTGGATGAAACCAGCGTGTCAGCCCGTCTGCATGAG CCGCTGCCGGACGGGGCCATTATTCATATTGTCCCGCGTATTGCAGGGGCTGGAAAAGGTGGTCTGTTCCAGGTAGTGCT GGGTGCCGTGGCAATAGGCGCGTCATTTTTTACGGCCGGCGCTTCAATGGCTGCCTGGGGGGCGGCGTTATCTGCCGGTG CTATTTCGGCATCCTCGGTCCTGTTTTCTATGGGGGCGGCCATGATGCTGGGTGGTGTGGCGCAGATGCTGACGCCGCAG GCAAAAATTCCCTCGTCCCGGCAGACCGACAATGGCAAACAGAACACCTGGTTTTCGTCGCTGGACAACATGGTGGCCCA GGGTAATGCCCTGCCCGTGCTGTACGGCGAAATGCTGGTTGGCTCCCGCACCATTTCACAGGAAATCAGCACCCGGGATG AAGGTGGCGGCGGGCAGGTGGTGATCATCGGTCGATAA
Upstream 100 bases:
>100_bases GTTCATCGGTTGCCAATCATGCCGCGATTTACTGTGGCAACGGCGAACTGCTGCACCATATTCCTGATCAGCTCAGTAAA CGCGAGAGGTATACCGACAA
Downstream 100 bases:
>100_bases AACGAGCCGCCGGTCATGGACGGCCCGTGGAACAGTGCCTCACAGAGTGAATTTTATTTTATAACGCCACAGGCGATTCG TGCACCACCGCCCCCAAGCG
Product: phage tail assembly protein
Products: NA
Alternate protein names: Bacteriophage Lambda Tail Assembly Protein I; Bacteriophage Lambda Tail Assembly I; Tail Assembly Protein I; Lambda Tail Assembly I; Bacteriophage Tail Protein; Tail Assembly Protein I Prophage; Phage Tail Protein; Tail Assembly Protein; Phage-Related Protein Tail Component; Phage Tail Component; Tail Assembly Protein I-Like; Prophage LambdaSo Tail Assembly Protein I; Gp63 Phage Protein; Bacteriophage Protein; Phage Tail Assembly Protein I
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MATPHTLDMATPGMARVCLHGDLQRFGRRFSFSIKTGAEAIYALAVQIPGFRQKMNEGWYQIRIAGQDVDETSVSARLHE PLPDGAIIHIVPRIAGAGKGGLFQVVLGAVAIGASFFTAGASMAAWGAALSAGAISASSVLFSMGAAMMLGGVAQMLTPQ AKIPSSRQTDNGKQNTWFSSLDNMVAQGNALPVLYGEMLVGSRTISQEISTRDEGGGGQVVIIGR
Sequences:
>Translated_225_residues MATPHTLDMATPGMARVCLHGDLQRFGRRFSFSIKTGAEAIYALAVQIPGFRQKMNEGWYQIRIAGQDVDETSVSARLHE PLPDGAIIHIVPRIAGAGKGGLFQVVLGAVAIGASFFTAGASMAAWGAALSAGAISASSVLFSMGAAMMLGGVAQMLTPQ AKIPSSRQTDNGKQNTWFSSLDNMVAQGNALPVLYGEMLVGSRTISQEISTRDEGGGGQVVIIGR >Mature_224_residues ATPHTLDMATPGMARVCLHGDLQRFGRRFSFSIKTGAEAIYALAVQIPGFRQKMNEGWYQIRIAGQDVDETSVSARLHEP LPDGAIIHIVPRIAGAGKGGLFQVVLGAVAIGASFFTAGASMAAWGAALSAGAISASSVLFSMGAAMMLGGVAQMLTPQA KIPSSRQTDNGKQNTWFSSLDNMVAQGNALPVLYGEMLVGSRTISQEISTRDEGGGGQVVIIGR
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23510; Mature: 23379
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPHTLDMATPGMARVCLHGDLQRFGRRFSFSIKTGAEAIYALAVQIPGFRQKMNEGWY CCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEECCCHHEEHHHEEECCCHHHHHCCCEE QIRIAGQDVDETSVSARLHEPLPDGAIIHIVPRIAGAGKGGLFQVVLGAVAIGASFFTAG EEEECCCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHCC ASMAAWGAALSAGAISASSVLFSMGAAMMLGGVAQMLTPQAKIPSSRQTDNGKQNTWFSS CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LDNMVAQGNALPVLYGEMLVGSRTISQEISTRDEGGGGQVVIIGR HHHHHHCCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure ATPHTLDMATPGMARVCLHGDLQRFGRRFSFSIKTGAEAIYALAVQIPGFRQKMNEGWY CCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEECCCHHEEHHHEEECCCHHHHHCCCEE QIRIAGQDVDETSVSARLHEPLPDGAIIHIVPRIAGAGKGGLFQVVLGAVAIGASFFTAG EEEECCCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHCC ASMAAWGAALSAGAISASSVLFSMGAAMMLGGVAQMLTPQAKIPSSRQTDNGKQNTWFSS CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LDNMVAQGNALPVLYGEMLVGSRTISQEISTRDEGGGGQVVIIGR HHHHHHCCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA