| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16764283
Identifier: 16764283
GI number: 16764283
Start: 992892
End: 993587
Strand: Direct
Name: 16764283
Synonym: STM0921
Alternate gene names: NA
Gene position: 992892-993587 (Clockwise)
Preceding gene: 16764282
Following gene: 16764284
Centisome position: 20.44
GC content: 58.05
Gene sequence:
>696_bases ATGCGGGACATTCCACAGGATACGCTGAGCCAAACCACGAAAACCGAGCAGTCGGCCCGCATTGATTTGTGGGAAATCGA CCTGACGGCCATTGGTGGCCAGCGTTACTATTTTTCAAACGAACTGAATGAGAAGGGCGATCCGGTTACCTGGCAGGGGC GTAAGTATGACGCTTACCCGATACAGGGAACCGGCTTTGAGCTGTCAGGGAAAGGGACATCTGCACGACCAACGCTGGCG GTGTCGAACCTGTTTGGTATGGTCACGGGACTTGCGGAAGATGTGCAGAGCCTGGTCGGGGGCACAGTGGTCAGGCGTGT GGTGTATGCCCGTTTTCTTGATGCGGTGAATTTTACAGGTGGCAACCCGGAGGCCGATCCGGAACAGGAAGTGGTCAGCC GCTGGGTGATTGAACAGCTGTCGGAACTGAAAAAAACCACGGCGACCTTCGTGCTGGCCACGCCGACCGAAACGGACGGC AGCGTGTTTCCGGGGCGGACCATGCTGGCCGATGTCTGCAACTGGACCTACCGCTCTGATGAGTGCGGTTATGCCGGGCC ACCCGTGGCGGATGAGTTTGACAAGCCCACAGCAGATCCGTCGAAGGACGCATGCAGCAAATGCCGTACCGGCTGCGAGC TGCGTGATAACCTGCCGCGCATCGGCTGCTTCCTCTCTATAAACCGCCTTTCCTGA
Upstream 100 bases:
>100_bases TACTATGTAAACCCTCCGATGCGAGGGTTTTTTGTAAGCTCCTTTGGGGCGTAATCAATGCCACTTGCTATGCACGTGGT TTTTTTTTACGGGAGAGGTC
Downstream 100 bases:
>100_bases CGGAGAACAGTATGGAAAAGACTATCCTGGTGCATGCCGCAGCGTGTGCACCGGCAGAATCGTGCGGCTATGTGGTGAAC ACGTCTGCAGGGGAACGGTA
Product: minor tail protein
Products: NA
Alternate protein names: Minor Tail Protein L; Minor Tail Protein; Phage Protein; Phage Minor Tail Protein; Phage-Related Minor Tail Protein L; Phage Tail Protein; Prophage LambdaSo Minor Tail Protein L; Gifsy-2 Prophage Minor Tail Protein; Phage Tail Component L-Like Protein; Gifsy-1 Prophage VmtL; Phage-Related Protein; Minor Tail Fiber Protein L; Gp65 Phage Protein; Phage-Like Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MRDIPQDTLSQTTKTEQSARIDLWEIDLTAIGGQRYYFSNELNEKGDPVTWQGRKYDAYPIQGTGFELSGKGTSARPTLA VSNLFGMVTGLAEDVQSLVGGTVVRRVVYARFLDAVNFTGGNPEADPEQEVVSRWVIEQLSELKKTTATFVLATPTETDG SVFPGRTMLADVCNWTYRSDECGYAGPPVADEFDKPTADPSKDACSKCRTGCELRDNLPRIGCFLSINRLS
Sequences:
>Translated_231_residues MRDIPQDTLSQTTKTEQSARIDLWEIDLTAIGGQRYYFSNELNEKGDPVTWQGRKYDAYPIQGTGFELSGKGTSARPTLA VSNLFGMVTGLAEDVQSLVGGTVVRRVVYARFLDAVNFTGGNPEADPEQEVVSRWVIEQLSELKKTTATFVLATPTETDG SVFPGRTMLADVCNWTYRSDECGYAGPPVADEFDKPTADPSKDACSKCRTGCELRDNLPRIGCFLSINRLS >Mature_231_residues MRDIPQDTLSQTTKTEQSARIDLWEIDLTAIGGQRYYFSNELNEKGDPVTWQGRKYDAYPIQGTGFELSGKGTSARPTLA VSNLFGMVTGLAEDVQSLVGGTVVRRVVYARFLDAVNFTGGNPEADPEQEVVSRWVIEQLSELKKTTATFVLATPTETDG SVFPGRTMLADVCNWTYRSDECGYAGPPVADEFDKPTADPSKDACSKCRTGCELRDNLPRIGCFLSINRLS
Specific function: Unknown
COG id: COG4672
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25397; Mature: 25397
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDIPQDTLSQTTKTEQSARIDLWEIDLTAIGGQRYYFSNELNEKGDPVTWQGRKYDAYP CCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCC IQGTGFELSGKGTSARPTLAVSNLFGMVTGLAEDVQSLVGGTVVRRVVYARFLDAVNFTG CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GNPEADPEQEVVSRWVIEQLSELKKTTATFVLATPTETDGSVFPGRTMLADVCNWTYRSD CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC ECGYAGPPVADEFDKPTADPSKDACSKCRTGCELRDNLPRIGCFLSINRLS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCEEEEEEEECCC >Mature Secondary Structure MRDIPQDTLSQTTKTEQSARIDLWEIDLTAIGGQRYYFSNELNEKGDPVTWQGRKYDAYP CCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCEEEEECCCCCCCCCCCEECCCCCCCCC IQGTGFELSGKGTSARPTLAVSNLFGMVTGLAEDVQSLVGGTVVRRVVYARFLDAVNFTG CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GNPEADPEQEVVSRWVIEQLSELKKTTATFVLATPTETDGSVFPGRTMLADVCNWTYRSD CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC ECGYAGPPVADEFDKPTADPSKDACSKCRTGCELRDNLPRIGCFLSINRLS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA