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The map label for this gene is ybjM [H]

Identifier: 16764233

GI number: 16764233

Start: 944665

End: 945042

Strand: Direct

Name: ybjM [H]

Synonym: STM0871

Alternate gene names: 16764233

Gene position: 944665-945042 (Clockwise)

Preceding gene: 16764231

Following gene: 16764235

Centisome position: 19.45

GC content: 51.59

Gene sequence:

>378_bases
TTGAAACATAAACACGGGTGGGCAAGCGTTGTCTGCTGCTTTGTACTCTTTATTGTGGTGTGTCTTTCATTAACTATGCA
TGTACAAGGCGCTTTTCGCGCGGCAGGGCATCCTGAGATTGGACTGTTATTTTTTACGTTGCCTGGTGCGGTGGCCAGCT
TTTGTTCTCACCGGCGCGAGGTGATCCGACCGCTGATCGGGGCGATGCTGGCGGCGCCGTTTTGCCTGGTGTTAATGCGC
GTGGTATTTATGCCTACCCGATCGTTTTGGCAAGAACTCGCGTGGTTATTTAGCGCCGTATTCTGGTGTGCGTTAGGCGC
GCTCTGTTATTTGTTTATTAGCAGCCTGTTTAGCCACCGGCGAAAAAAACGCCGATAG

Upstream 100 bases:

>100_bases
TCGTGCAGGTGTGTTTTTGGCATGGAATGCCACATGACTTTATCTGACTGGATGCCTCACGGCGGAAAGCGTGTTCGATA
GAGAGTGTCAGGAGGAACGA

Downstream 100 bases:

>100_bases
CGCCCTCCGTCAGAGGGCGTTGCCAGAGCAATCAGGCGAAAAGATTCAGATTTTCTTTTGCCCATGCTTCAAAATCCGTA
CAGCCGCCGATATGTTTTTG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMR
VVFMPTRSFWQELAWLFSAVFWCALGALCYLFISSLFSHRRKKRR

Sequences:

>Translated_125_residues
MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMR
VVFMPTRSFWQELAWLFSAVFWCALGALCYLFISSLFSHRRKKRR
>Mature_125_residues
MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMR
VVFMPTRSFWQELAWLFSAVFWCALGALCYLFISSLFSHRRKKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787072, Length=125, Percent_Identity=73.6, Blast_Score=188, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020368
- ProDom:   PD079046 [H]

Pfam domain/function: PF11045 YbjM [H]

EC number: NA

Molecular weight: Translated: 14220; Mature: 14220

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFWCALGALCYLFISSLFSHR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKKRR
HHCCC
>Mature Secondary Structure
MKHKHGWASVVCCFVLFIVVCLSLTMHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFWCALGALCYLFISSLFSHR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKKRR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]