| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764201
Identifier: 16764201
GI number: 16764201
Start: 907237
End: 907980
Strand: Direct
Name: 16764201
Synonym: STM0839
Alternate gene names: NA
Gene position: 907237-907980 (Clockwise)
Preceding gene: 16764200
Following gene: 16764204
Centisome position: 18.68
GC content: 43.55
Gene sequence:
>744_bases TTGTTGCGTAATTATCATTCCAGTATGAAACAGGCAACGTGTGAACTTGTCCCTGAACTGGATTTTTTTGGTTTAGCAGG ATGGGGTAAGCATGTAATATCGATGGTTGGATTTAAAACGCCTTACCCTCAGGAATCAATCGAACAATGCGTCGCGCCAG CTCATTATCCCCAGGAAGTAAAAGAGCAAGTACGGGCAACCAGTGCAAATATTATTTTATATTATAAGGGGTATGATACT TCACCTTTAGAGCAATATGTTGCGTTGGCTGTGGTTGCAGGTGCATTAAGTAACATGGGGGCTGTCGCTGTATTAAATGA ATCGGCTCACACTTCATTACCTGCGGGGGTATTTAAGTCTCAGGAGTTGGGTAAGCATAGTCTGGAAATGTTGCGTGAAG GTTTCCCGCTGACCTCTCTATTTTGTGGATTTGTGAAATATGAAGTTGAGGATATCGAAGGCGTATGGATGCGTACCTAT GGTGCTGATTGCTTTGGGCTACCAGATTTCGCAGCACACGCACAAGGTCATCACGAAGGGCAAAAATATTCTGATATTTT CAATAATGTTCTGCGTTACCTGCTTGAAAGTGGAGCAGAAATGGCTGCCGGGCATACCATGCAAGTCGGTAAAACGACAT TTATGAAACTGCGCGATCCCCTTGACGATGAATATTACTTACAGGGGCCTGGAACCACATTAGTGGTTGAACTGATTGAA GAAGATGAGTGTAATGCTCATTGA
Upstream 100 bases:
>100_bases ACAAGGTGTTTTAGTAGCGAATGCTGAAGTTGATAACCCACTAAGTTTAGTTGTTGTATTTGATACTCTCCCGGAAAATA ATTCAAAAGAACTCACCCGC
Downstream 100 bases:
>100_bases GAAATCGGGGTAATTGCCCCGACTCTCGTTAAAGTGTAAACGGCACTTTATTTTCCAGCACCGCCTGAATCACATTCAGT GCGCCTTCATGCTTATTATT
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MLRNYHSSMKQATCELVPELDFFGLAGWGKHVISMVGFKTPYPQESIEQCVAPAHYPQEVKEQVRATSANIILYYKGYDT SPLEQYVALAVVAGALSNMGAVAVLNESAHTSLPAGVFKSQELGKHSLEMLREGFPLTSLFCGFVKYEVEDIEGVWMRTY GADCFGLPDFAAHAQGHHEGQKYSDIFNNVLRYLLESGAEMAAGHTMQVGKTTFMKLRDPLDDEYYLQGPGTTLVVELIE EDECNAH
Sequences:
>Translated_247_residues MLRNYHSSMKQATCELVPELDFFGLAGWGKHVISMVGFKTPYPQESIEQCVAPAHYPQEVKEQVRATSANIILYYKGYDT SPLEQYVALAVVAGALSNMGAVAVLNESAHTSLPAGVFKSQELGKHSLEMLREGFPLTSLFCGFVKYEVEDIEGVWMRTY GADCFGLPDFAAHAQGHHEGQKYSDIFNNVLRYLLESGAEMAAGHTMQVGKTTFMKLRDPLDDEYYLQGPGTTLVVELIE EDECNAH >Mature_247_residues MLRNYHSSMKQATCELVPELDFFGLAGWGKHVISMVGFKTPYPQESIEQCVAPAHYPQEVKEQVRATSANIILYYKGYDT SPLEQYVALAVVAGALSNMGAVAVLNESAHTSLPAGVFKSQELGKHSLEMLREGFPLTSLFCGFVKYEVEDIEGVWMRTY GADCFGLPDFAAHAQGHHEGQKYSDIFNNVLRYLLESGAEMAAGHTMQVGKTTFMKLRDPLDDEYYLQGPGTTLVVELIE EDECNAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27399; Mature: 27399
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNYHSSMKQATCELVPELDFFGLAGWGKHVISMVGFKTPYPQESIEQCVAPAHYPQEV CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHH KEQVRATSANIILYYKGYDTSPLEQYVALAVVAGALSNMGAVAVLNESAHTSLPAGVFKS HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH QELGKHSLEMLREGFPLTSLFCGFVKYEVEDIEGVWMRTYGADCFGLPDFAAHAQGHHEG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHCCCCCCCCCCCHHHHCCCCCCC QKYSDIFNNVLRYLLESGAEMAAGHTMQVGKTTFMKLRDPLDDEYYLQGPGTTLVVELIE HHHHHHHHHHHHHHHHCCCHHHCCCEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHH EDECNAH CCCCCCC >Mature Secondary Structure MLRNYHSSMKQATCELVPELDFFGLAGWGKHVISMVGFKTPYPQESIEQCVAPAHYPQEV CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHH KEQVRATSANIILYYKGYDTSPLEQYVALAVVAGALSNMGAVAVLNESAHTSLPAGVFKS HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH QELGKHSLEMLREGFPLTSLFCGFVKYEVEDIEGVWMRTYGADCFGLPDFAAHAQGHHEG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHCCCCCCCCCCCHHHHCCCCCCC QKYSDIFNNVLRYLLESGAEMAAGHTMQVGKTTFMKLRDPLDDEYYLQGPGTTLVVELIE HHHHHHHHHHHHHHHHCCCHHHCCCEEHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHH EDECNAH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA