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The map label for this gene is ybhQ [H]

Identifier: 16764177

GI number: 16764177

Start: 879241

End: 879651

Strand: Direct

Name: ybhQ [H]

Synonym: STM0814

Alternate gene names: 16764177

Gene position: 879241-879651 (Clockwise)

Preceding gene: 16764173

Following gene: 16764183

Centisome position: 18.1

GC content: 56.45

Gene sequence:

>411_bases
ATGAAGTGGCAACAACGCGTTCGTGTCGCAACCGGCCTCGGTTGTTGGCAGATTATGTTGCATTTACTGGTAGTGGCAAT
GCTGGTAATAGGCTGGATGAGCGGCACATTAGTGCGCGTCGGCCTGGGATTATGCGTGCTTTATGGCGTGACGGTACTGC
TGATGCTGGCGTTGCAGCGCCATCATGAGCAACGCTGGCGCGATGTGGCGGATGTGCTGGAAGAGCTGACTACCACCTGG
TACTTCGGCACCGCGCTGATTGTCCTCTGGCTGCTATCCCGCGTCTTGCAAAACAATGTTTTACTGGCGCTGGCGGGGCT
GGCTATCCTGGCCGGGCCCGCCGTGGTCTCGCTACTGGCGAAAGATAAAAAGCTACATCACTTTGCGTCTAAACATCGCA
TACGCCGCTGA

Upstream 100 bases:

>100_bases
AATAGTGTAGTCGTCGTCACAAAAAGATGCGGTCTTACGGAATTTTCCGTAAAGTTCGGTACTCTGAATAATGAGAGAAA
AATGCTTCAGGAGAAAAGCC

Downstream 100 bases:

>100_bases
ACCCGTGGTGGCCGCTATCACCAGTAGCGGCCACAAACTTCCCCAGACAATCCCCAGACTCGCGTCCTTAAGATAAATTT
GCTTAGTAATATCAGTAAAG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGLCVLYGVTVLLMLALQRHHEQRWRDVADVLEELTTTW
YFGTALIVLWLLSRVLQNNVLLALAGLAILAGPAVVSLLAKDKKLHHFASKHRIRR

Sequences:

>Translated_136_residues
MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGLCVLYGVTVLLMLALQRHHEQRWRDVADVLEELTTTW
YFGTALIVLWLLSRVLQNNVLLALAGLAILAGPAVVSLLAKDKKLHHFASKHRIRR
>Mature_136_residues
MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGLCVLYGVTVLLMLALQRHHEQRWRDVADVLEELTTTW
YFGTALIVLWLLSRVLQNNVLLALAGLAILAGPAVVSLLAKDKKLHHFASKHRIRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787009, Length=136, Percent_Identity=84.5588235294118, Blast_Score=214, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021303 [H]

Pfam domain/function: PF11076 YbhQ [H]

EC number: NA

Molecular weight: Translated: 15370; Mature: 15370

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGLCVLYGVTVLLMLALQR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHEQRWRDVADVLEELTTTWYFGTALIVLWLLSRVLQNNVLLALAGLAILAGPAVVSLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKKLHHFASKHRIRR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKWQQRVRVATGLGCWQIMLHLLVVAMLVIGWMSGTLVRVGLGLCVLYGVTVLLMLALQR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHEQRWRDVADVLEELTTTWYFGTALIVLWLLSRVLQNNVLLALAGLAILAGPAVVSLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDKKLHHFASKHRIRR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]