| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is fecD [C]
Identifier: 16764134
GI number: 16764134
Start: 834417
End: 835496
Strand: Direct
Name: fecD [C]
Synonym: STM0770
Alternate gene names: 16764134
Gene position: 834417-835496 (Clockwise)
Preceding gene: 16764133
Following gene: 16764135
Centisome position: 17.18
GC content: 55.09
Gene sequence:
>1080_bases ATGACCTGTCAGGACAAATCACTTTTAGCCCCCGCTCTCGCTTCCACGCCCGTCATTCCGCGCTATCGCCAGATCATACG CAAACGGGCTGTGCTCATGTTAGCTATTGCGTTGGCGATGATGGCTTCACTGATGGTGGATGTAACCTGTGGGTCTTCTG GTTTACCGCTCAGTGCGCTATGGCAGGCGCTTTTTCAACCGGAAAAAGTGAATGCGGGCATACACGTTATTGTCTGGGAT ATTCGTTTACCCTATGCCCTGATGGCCCTACTGGTGGGCATGGCGTTAGGGTTAGCGGGCGCCGAAATGCAAACCATTTT AAATAATCCGCTGGCGACGCCGTTTACCCTCGGCGTATCGTCCGCGGCGGCTTTTGGCGCTGCGCTGGCGATTGTGTTGG GGATCGGTATTCCCGGTATTCCTGCCGCCTGGTTTATCCCGGCCAATGCGTTCATCTTTGCGCTGTTATCCGCGTTACTC CTGGACGGTATTACCCGTTGGACAGGCGTCGCCGCATCCGGAGTGGTGTTGTTTGGTATTGCGCTGGTATTCACCTTTAA CGCGTTGGTCGCCATTATGCAGTTTGTGGCTGATGAAGATACGCTGCAGGGGCTGGTATTCTGGACGATGGGGAGCCTGG TCCGCGCGTCGTGGGAAAAATTGGGCGTACTGGCCGTGGTGTTTATTGCTGTGCTTTTTTGCGCGTTACGAAGCGCCTGG CAACTCACGGCATTACGTCTGGGCGAAGAGAGGGCGATGAGCTTTGGGATTCATGTCCGCCGTTTACGCCTGCTGTCATT GTTGCGTATCAGCTTGTTATCAGCGCTGGCGGTAGCTTTCGTCGGGCCGATTGGTTTTATTGGTCTCGTTGCGCCGCACA TTGCGCGAATACTTTTGGGGGAAGATCACCGTTTCTACCTTCCGGGCAGCGTGCTGATAGGCGGGCTGGTGTTATCGCTG GCCTCTATTGCGGCGAAAAATAGTATTCCGGGCGTCATGGTGCCGGTGGGGATTGTCACCTCGCTGGTCGGGGTTCCGTT CTTTTTAAGCATTGTATTGCGACATCGGGGGAGTCTCTGA
Upstream 100 bases:
>100_bases ATGAGATAGGCCACCGTGTCATTAATCGAAATATAAATAAATATATAACGAAATAATTCGGCGCTATAATTCTCCTCTGA TTAATAACGTAGCCCGAACC
Downstream 100 bases:
>100_bases TGCGCGGGTTAATGCTCCGCTCATTTAGCGCCGGCTATTCCACTCAGCCGGTTATTGCAGATCTCAACGTTCCCTTACTG CCGCGCGGGAAAATTACCAT
Product: ABC transport protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTCQDKSLLAPALASTPVIPRYRQIIRKRAVLMLAIALAMMASLMVDVTCGSSGLPLSALWQALFQPEKVNAGIHVIVWD IRLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVSSAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALL LDGITRWTGVAASGVVLFGIALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAW QLTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLGEDHRFYLPGSVLIGGLVLSL ASIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRGSL
Sequences:
>Translated_359_residues MTCQDKSLLAPALASTPVIPRYRQIIRKRAVLMLAIALAMMASLMVDVTCGSSGLPLSALWQALFQPEKVNAGIHVIVWD IRLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVSSAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALL LDGITRWTGVAASGVVLFGIALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAW QLTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLGEDHRFYLPGSVLIGGLVLSL ASIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRGSL >Mature_358_residues TCQDKSLLAPALASTPVIPRYRQIIRKRAVLMLAIALAMMASLMVDVTCGSSGLPLSALWQALFQPEKVNAGIHVIVWDI RLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVSSAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALLL DGITRWTGVAASGVVLFGIALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAWQ LTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLGEDHRFYLPGSVLIGGLVLSLA SIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRGSL
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790740, Length=296, Percent_Identity=32.7702702702703, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1786805, Length=314, Percent_Identity=37.8980891719745, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788004, Length=281, Percent_Identity=34.5195729537367, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=35.6643356643357, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786347, Length=278, Percent_Identity=31.294964028777, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786804, Length=285, Percent_Identity=32.280701754386, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37967; Mature: 37836
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCQDKSLLAPALASTPVIPRYRQIIRKRAVLMLAIALAMMASLMVDVTCGSSGLPLSAL CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH WQALFQPEKVNAGIHVIVWDIRLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVS HHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCHH SAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALLLDGITRWTGVAASGVVLFGI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAW HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDHRFYLPGSVLIGGLVLSLASIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRGSL CCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TCQDKSLLAPALASTPVIPRYRQIIRKRAVLMLAIALAMMASLMVDVTCGSSGLPLSAL CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH WQALFQPEKVNAGIHVIVWDIRLPYALMALLVGMALGLAGAEMQTILNNPLATPFTLGVS HHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCHH SAAAFGAALAIVLGIGIPGIPAAWFIPANAFIFALLSALLLDGITRWTGVAASGVVLFGI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVFTFNALVAIMQFVADEDTLQGLVFWTMGSLVRASWEKLGVLAVVFIAVLFCALRSAW HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLTALRLGEERAMSFGIHVRRLRLLSLLRISLLSALAVAFVGPIGFIGLVAPHIARILLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EDHRFYLPGSVLIGGLVLSLASIAAKNSIPGVMVPVGIVTSLVGVPFFLSIVLRHRGSL CCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]