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The map label for this gene is dcoB [H]

Identifier: 16764132

GI number: 16764132

Start: 831919

End: 833220

Strand: Direct

Name: dcoB [H]

Synonym: STM0768

Alternate gene names: 16764132

Gene position: 831919-833220 (Clockwise)

Preceding gene: 16764131

Following gene: 16764133

Centisome position: 17.13

GC content: 64.13

Gene sequence:

>1302_bases
ATGGAAAGTCTGAACGCCCTGCTTCAGGGCATGGGGCTGATGCACCTTGGCGCAGGCCAGGCCATCATGCTGCTGGTCAG
CCTGCTGCTGCTGTGGCTGGCGATTGCGAAGAAGTTCGAGCCGTTACTGCTGCTGCCGATAGGCTTCGGCGGGCTGCTGT
CGAACATTCCGGAGGCCGGGCTGGCGCTGACCGCGCTGGAAAGCCTGCTGGCGCACCACGACGCCGGACAGCTGGCGGTG
ATTGCCGCGAAGCTCCACTGCGCGCCGGACGTGCATGCCATTAAGGAAGCATTAGCGCTGGCGCTGCCCTCCGTCCAGAA
CCAGATGGAAAATCTGGCGGTGGACATGGGCTACACGCCGGGGGTGCTGGCGCTGTTCTACAAAGTGGCGATTGGCTCCG
GTGTCGCGCCGCTGGTCATCTTCATGGGCGTCGGCGCGATGACCGACTTCGGCCCGCTGCTGGCCAACCCGCGCACCCTG
CTGCTCGGCGCGGCGGCGCAGTTCGGTATCTTCGCCACCGTGCTGGGGGCGCTGACGCTGAACTACTTCGGCCTTATCAG
CTTCACCCTGCCGCAGGCGGCGGCCATCGGCATTATCGGCGGCGCGGACGGCCCGACGGCGATTTATCTGTCGGGCAAGC
TGGCGCCGGAGCTGCTGGGGGCCATCGCGGTGGCGGCGTACTCGTATATGGCGCTGGTGCCGTTAATCCAGCCGCCGATT
ATGAAAGCGCTGACCACGGAGACGGAGCGGAAAATCCGCATGGTGCAGCTGCGCACGGTGAGTAAGCGGGAAAAAATCCT
CTTTCCGGTGGTGCTGTTACTACTGGTGGCGCTGCTGCTGCCGGACGCCGCGCCGCTGCTGGGGATGTTCTGCTTTGGCA
ATCTGATGCGCGAAAGCGGCGTGGTGGAGCGCCTGAGCGACACGGTACAGAACGGGCTGATTAATATCGTCACCATCTTC
CTCGGGCTGTCGGTGGGCGCGAAGCTGGTGGCGGACAAGTTCCTGCAACCGCAGACGCTGGGCATTCTGCTGCTGGGGGT
GATTGCGTTTGGTATCGGGACGGCGGCCGGGGTACTGATGGCGAAGCTGCTGAACCTGTGCAGTAAGAACAAAATCAACC
CGCTTATTGGTTCGGCGGGGGTGTCGGCGGTGCCGATGGCGGCCCGCGTATCGAACAAGGTGGGCCTGGAGTCGGACCCG
CAGAACTTTCTGCTGATGCACGCGATGGGCCCGAACGTGGCCGGGGTGATTGGCTCGGCGATAGCCGCCGGGGTGATGCT
GAAGTACGTGCTGGCGATGTAA

Upstream 100 bases:

>100_bases
CGCGCAGGCCGGGACGGTACGCGGTATCGCGGTGAAGTCCGGCGATGCGGTCTCCGTCGGCGACACCCTGATGACGCTGG
CGTAAGGACGAGGAGCGGAA

Downstream 100 bases:

>100_bases
ATCTGTTCCTTTCCCGGAGGCGGCGCGTTGCGCCTGTCCGGGCTACCGGATTGCATGGATCTGTAGCCCGGACAGATGCG
CAGCATCGTCTCCGGGAATG

Product: oxaloacetate decarboxylase beta chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGLALTALESLLAHHDAGQLAV
IAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTTETERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Sequences:

>Translated_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGLALTALESLLAHHDAGQLAV
IAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTTETERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM
>Mature_433_residues
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGLALTALESLLAHHDAGQLAV
IAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTL
LLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
MKALTTETERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDP
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 44946; Mature: 44946

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
LALTALESLLAHHDAGQLAVIAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MKALTTETERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC
>Mature Secondary Structure
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCH
LALTALESLLAHHDAGQLAVIAAKLHCAPDVHAIKEALALALPSVQNQMENLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHH
MKALTTETERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESDPQNFLLMHAMGPNVAGVIGSA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVLAM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]